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Clone Read LE_HBa0100A22_SP6_31914

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0100A22_SP6_31914
Primer
SP6
ID from Seq. Facility
LE_HBa_100_A22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
612 trimmed for vector and quality, 897 raw
Genbank Accession
Sequence
>LE_HBa0100A22_SP6_31914 (raw untrimmed)
CCGGGCTTTGGGGAATTTATTTTCTCAAGACTCGATATGTCCTCATATATTCAAGGACATAGTCTATATTTCATTAGCTTCTTCTTTTAAGACTTGTAAA
GACTTACTATGTATTGCTTTCAATGTAAAGGGTCGTGTCCCGAAGATATTTATGTCGTGTCTTTAAGTTGACTTGTGACGATGAGACTATACTTAGTATT
TATAAAAAAATGTTTTCCTTTTATTATTTATCAAGAAAAGTGTAAGTTTCTGCAATATTTTTCATGTCTTAGGTAATGAATGATAGTTGAGAGGATTGTG
CAAGACCTTCGAAAGGTCGAGTACACCTTGTGACGACCTAAGGGTTGCCTCAACTTCTAGGTGTACTTGTTGGTCTTTAAAGGTTGCATGATTAATTTGC
TTCCATAGATTGTAGAATAAGGATGGTGAAGTTAAACTTTCAAAATGAGCCCTTTTTAGAGTGGAAGGACGAAAACTACTTCTAGAGGTCCTATCATTTC
TTGTTTGAAAGCTTGTAAGATGATACCTAAATGGCATTTATACCATATTGTAAGTAGTCAACGATTAAGAGTCCAAAATTCTTCCAATTGAGTCAGTCAC
CATAGTGAGGGAATTTCCGAATGTCTTTCCTAATGATCTTCTCAATATGCCCCCTGAACGAGAAGTTATTTTTAGTATCATATATACTCGATACAAGACC
CTTACAATTCTTCTTATCCGACGGCTCCCGCTCAATTGTATGATTCTAACACCTCACTCTCAATTAACTATACAACACTCTTGTTCGGCTCTCATTTCTC
GCTCTGGCGTTGTCCTGTACAATTCTCTAAACCACACGGGGGGCCGCCTCATTAGAGAGTCGAATACCCCTTTTTACTCTTCTTTTTTTCTTTTTTC
>LE_HBa0100A22_SP6_31914 (trimmed for quality and cloning vector)
TTTTCTCAAGACTCGATATGTCCTCATATATTCAAGGACATAGTCTATATTTCATTAGCTTCTTCTTTTAAGACTTGTAAAGACTTACTATGTATTGCTT
TCAATGTAAAGGGTCGTGTCCCGAAGATATTTATGTCGTGTCTTTAAGTTGACTTGTGACGATGAGACTATACTTAGTATTTATAAAAAAATGTTTTCCT
TTTATTATTTATCAAGAAAAGTGTAAGTTTCTGCAATATTTTTCATGTCTTAGGTAATGAATGATAGTTGAGAGGATTGTGCAAGACCTTCGAAAGGTCG
AGTACACCTTGTGACGACCTAAGGGTTGCCTCAACTTCTAGGTGTACTTGTTGGTCTTTAAAGGTTGCATGATTAATTTGCTTCCATAGATTGTAGAATA
AGGATGGTGAAGTTAAACTTTCAAAATGAGCCCTTTTTAGAGTGGAAGGACGAAAACTACTTCTAGAGGTCCTATCATTTCTTGTTTGAAAGCTTGTAAG
ATGATACCTAAATGGCATTTATACCATATTGTAAGTAGTCAACGATTAAGAGTCCAAAATTCTTCCAATTGAGTCAGTCACCATAGTGAGGGAATTTCCG
AATGTCTTTCCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.948658
Expected error %
0.472024
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0100A22
Clone
Clone name
hba-100a22
LE_HBa0100A22
P100A22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found