Clone Read LE_HBa0100L22_SP6_32442

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0100L22_SP6_32442
Primer
SP6
ID from Seq. Facility
LE_HBa_100_L22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
645 trimmed for vector and quality, 879 raw
Genbank Accession
Sequence
>LE_HBa0100L22_SP6_32442 (raw untrimmed)
CGGCTGATTTTGAGTGATTTGGCTGCGATTGTATGATCTGCCTTTCCAAGAACTCTTCACCTTAAGAATCCATGGAATCAAGACAAACCAGTCAAAATTA
GTAGAGATTGCCAGGCATGGGTTATATTCTTGTCTTAGTACTATTCACTTGTTTTTTCAATGTACTCTTGTTAGTAAAGAGGCTTTTATGACCCTGGTAC
ATGTATTGCTGTCAGGAGTTACCTCCAGATATTGGTGAAGCTTTATGTGAGCTTCTTGAAGGACAGGATTCTATGGATGTTGATTTGAAAATGTATAGCC
CTTTCCTCTAAAACTTAAATAGTGTGTTGCCGTTCCATTATTTGGAAACAGACAGCCTTTTCTCAAAATTGAATTAGTACTACAGTTGTGGAAAAATTTG
TCCAATTGATTTTTCTCTTTATAATTGTTATTGGCTCATCCAGGGATACCTTTGCAAGGAATGATCTCTCTTCTAAAAGGCCATATGTAGAGCCTTCACT
GCATCTTGGATTTCAAGACTGTAATGCATCTCTGGTACCTAATGGGACCATGTTTTATCCCTCTTCACTCTATCAACATCAAATTGATGCTAGTAGACTT
CAGGTAGCACCTGTGAGAATAAATGGTGTATTTTCTGCTGAAGAGTCAGCCATTGCATCAGTGGAATCAAAGTCGAGACAGTCGAGGCATTCAAAGAGGA
ATAGAAGCCTTGCTAATTCTTCATGTAGATACTGGCATGGGTCCTCAAATTAACATGTTGGGCTTGCCGGCAGAAAAGACCCTCTTTTCTATATTTGACT
GGAATTGACATTCTTGAAATGTTTGTGTTTACTCGTCTACCATTATATTATAGAATTTCTCTCCTAACCGTTATTCCAA
>LE_HBa0100L22_SP6_32442 (trimmed for quality and cloning vector)
GCTGCGATTGTATGATCTGCCTTTCCAAGAACTCTTCACCTTAAGAATCCATGGAATCAAGACAAACCAGTCAAAATTAGTAGAGATTGCCAGGCATGGG
TTATATTCTTGTCTTAGTACTATTCACTTGTTTTTTCAATGTACTCTTGTTAGTAAAGAGGCTTTTATGACCCTGGTACATGTATTGCTGTCAGGAGTTA
CCTCCAGATATTGGTGAAGCTTTATGTGAGCTTCTTGAAGGACAGGATTCTATGGATGTTGATTTGAAAATGTATAGCCCTTTCCTCTAAAACTTAAATA
GTGTGTTGCCGTTCCATTATTTGGAAACAGACAGCCTTTTCTCAAAATTGAATTAGTACTACAGTTGTGGAAAAATTTGTCCAATTGATTTTTCTCTTTA
TAATTGTTATTGGCTCATCCAGGGATACCTTTGCAAGGAATGATCTCTCTTCTAAAAGGCCATATGTAGAGCCTTCACTGCATCTTGGATTTCAAGACTG
TAATGCATCTCTGGTACCTAATGGGACCATGTTTTATCCCTCTTCACTCTATCAACATCAAATTGATGCTAGTAGACTTCAGGTAGCACCTGTGAGAATA
AATGGTGTATTTTCTGCTGAAGAGTCAGCCATTGCATCAGTGGAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.959654
Expected error %
0.0616047
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0100L22
Clone
Clone name
hba-100l22
LE_HBa0100L22
P100L22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found