Clone Read LE_HBa0008D18_SP6_3250

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0008D18_SP6_3250
Primer
SP6
ID from Seq. Facility
LE_HBa_008_D18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
585 trimmed for vector and quality, 949 raw
Genbank Accession
Sequence
>LE_HBa0008D18_SP6_3250 (raw untrimmed)
GACCAGGCCCGTGAGAAAGATATAGACACGTCTCAGAGTGGCAACCGGCGTGCTTGACCTCTCGGAGGTCTTGTACAAGCCCTTCCATATCGCCCATCAT
ATATAAACATATGAAGAGTAGTGCGGAATTAAAACTTTTCACACGAATATATTAAAAATTCTTTTCATATAAAATCATAGAAATTCTAAGTTTAATTTCA
TCAAATCTTAGACACAAGAATAATTTGGGACACGACCCATACACAATACGAATATAGAAATACTAGTCTATTACAATATTTTGAACTAAAAGACATCTAT
AAATGCTCTCGAGTCAGTTGAGGGCATACTTCAACTTTGCTTGAATGACTCTAGAGTCCAAGCTCTCCTTCACGATCCTTCTAACCTTTCACCTAAACCT
TTAGAGATAACAAAATGTATGTAATTAGTACAAACACTTGTACTAAGTAGGGCATTATGCATAAAATCATGTAAATGGACATTTTATTAGAAACATGCAT
GTTTTCATTTAAATATCATATCATAATCATAAGAATAACATTTAACACCTTAGAAACACATAAGAAGTCACTTAGCCAATTTATTACATTTTTAGCAAAC
CTTACAGTAAAGTATATCATTGTTACAGTAAAATTAATTTCACTTCACTTTAGATACTTCCTAGCATGTAATTCCGTCACTAAAAGTTATCCTAAGACTC
ACTTAAGTAAGACAAAGAGAGACCGCCCTTCACCGTCCTCTAGGCCACCTAAATGATCCTTTAGACCACCTATAATGAGTAAACATACTCATAATAAACA
ACCCATGAACAATTGACATTTCATCTTCAAATGCCTACCAAAGATTTACTAAGGAAATAAAAAGAAATGGTCCGAATTACCCTTTTAGATTTTCTAAATA
ACCTTACAATCCCAAGGGTTAATTGTGCCCCCCAGCAAATTTCCCCAAA
>LE_HBa0008D18_SP6_3250 (trimmed for quality and cloning vector)
AACCGGCGTGCTTGACCTCTCGGAGGTCTTGTACAAGCCCTTCCATATCGCCCATCATATATAAACATATGAAGAGTAGTGCGGAATTAAAACTTTTCAC
ACGAATATATTAAAAATTCTTTTCATATAAAATCATAGAAATTCTAAGTTTAATTTCATCAAATCTTAGACACAAGAATAATTTGGGACACGACCCATAC
ACAATACGAATATAGAAATACTAGTCTATTACAATATTTTGAACTAAAAGACATCTATAAATGCTCTCGAGTCAGTTGAGGGCATACTTCAACTTTGCTT
GAATGACTCTAGAGTCCAAGCTCTCCTTCACGATCCTTCTAACCTTTCACCTAAACCTTTAGAGATAACAAAATGTATGTAATTAGTACAAACACTTGTA
CTAAGTAGGGCATTATGCATAAAATCATGTAAATGGACATTTTATTAGAAACATGCATGTTTTCATTTAAATATCATATCATAATCATAAGAATAACATT
TAACACCTTAGAAACACATAAGAAGTCACTTAGCCAATTTATTACATTTTTAGCAAACCTTACAGTAAAGTATATCATTGTTACA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.935393
Expected error %
0.268354
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0008D18
Clone
Clone name
hba-8d18
LE_HBa0008D18
P008D18
Clone type
BAC
Contamination
none
Estimated length
104,952
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found