Clone Read LE_HBa0008D18_T7_3251

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0008D18_T7_3251
Primer
T7
ID from Seq. Facility
LE_HBa_008_D18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
734 trimmed for vector and quality, 1001 raw
Genbank Accession
Sequence
>LE_HBa0008D18_T7_3251 (raw untrimmed)
TATACCTGGGCCCCGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTATTATTACGATCCATATGAAAATGATGCAGTTCGAATGGCAAAAAAG
CCTGGTCATATTCCAGAATGTCAATTTAGAGAGCTACTCAAATATTGGAATTCTAAAAAATTCAAGGTAAAAATGTAGTTCAAAATATCAATTTTTTTTA
ATAAGAAGCATTTGTATTATAGCTCTTGATTTTCGCTCCCTTCCCAGCTTCTTCCCACCTAGTGACCCCCAACACTTTAAAGCTGTTAGAAAAAATAGTA
CCTCCCTTCCCAGCTTCTACGCTTCCTCTTGACTCTGTTTTCTCATAGGTGTCTTTTTAATCATCAAGTGGATCATTATCATGCCCAAACTTAAAGCCAT
TAGAGCAACATTTTGGCCTGTATCTGTAATTCAGACCTTACTAGAAAGACCCATAAGGAGCAGCAAGTGTAAATATCTCCACTTAAGTTTGATAAATGTC
AATGTCAATTGCAATGAAATATGATTCATTTCTATATATAATTCATACCTCTAGCATTATTATGGTTTGTACGTATACGGACCAGTCTGCATAACCTTCT
CTCTGACTGCTAAAAAAGTAAATCAAATCATATAGTAACCATCTGAATAGTATAGGTACTAAAGCATATGGATACAGTGCCAATACTGACTGCTATGACA
TAATTGTCCATAGTTGTGATATCGGTGTTGCTGACATAATAATATTGATTCTGGTTACCTGAAGGTTGGGTTGTAACTTTGGTGGTAAAAGAATGGGGAA
ATAGGCATAAATTCCGCCTTAATTTTTCCTTTCCTCCCTTCCGGTTTGGAATATTTGCAGCTTCATTTATGGGGAAGTCCCTGGAATTTACAAACCCCTA
AAAATAATTAATGACTATAATTGTAGATTGTAAAAAGGAAAAATGGACGTGTATAAGGAAAGCCCACCAATTGGACCTCCTAAAACACAATAAAACAATA
A
>LE_HBa0008D18_T7_3251 (trimmed for quality and cloning vector)
AGCTTTATTATTACGATCCATATGAAAATGATGCAGTTCGAATGGCAAAAAAGCCTGGTCATATTCCAGAATGTCAATTTAGAGAGCTACTCAAATATTG
GAATTCTAAAAAATTCAAGGTAAAAATGTAGTTCAAAATATCAATTTTTTTTAATAAGAAGCATTTGTATTATAGCTCTTGATTTTCGCTCCCTTCCCAG
CTTCTTCCCACCTAGTGACCCCCAACACTTTAAAGCTGTTAGAAAAAATAGTACCTCCCTTCCCAGCTTCTACGCTTCCTCTTGACTCTGTTTTCTCATA
GGTGTCTTTTTAATCATCAAGTGGATCATTATCATGCCCAAACTTAAAGCCATTAGAGCAACATTTTGGCCTGTATCTGTAATTCAGACCTTACTAGAAA
GACCCATAAGGAGCAGCAAGTGTAAATATCTCCACTTAAGTTTGATAAATGTCAATGTCAATTGCAATGAAATATGATTCATTTCTATATATAATTCATA
CCTCTAGCATTATTATGGTTTGTACGTATACGGACCAGTCTGCATAACCTTCTCTCTGACTGCTAAAAAAGTAAATCAAATCATATAGTAACCATCTGAA
TAGTATAGGTACTAAAGCATATGGATACAGTGCCAATACTGACTGCTATGACATAATTGTCCATAGTTGTGATATCGGTGTTGCTGACATAATAATATTG
ATTCTGGTTACCTGAAGGTTGGGTTGTAACTTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.956394
Expected error %
0.866434
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0008D18
Clone
Clone name
hba-8d18
LE_HBa0008D18
P008D18
Clone type
BAC
Contamination
none
Estimated length
104,952
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found