Clone Read LE_HBa0104J17_T7_33873

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0104J17_T7_33873
Primer
T7
ID from Seq. Facility
LE_HBa_104_J17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
700 trimmed for vector and quality, 921 raw
Genbank Accession
Sequence
>LE_HBa0104J17_T7_33873 (raw untrimmed)
GTAAGGCCGGTACCGGGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTCGAAGTCTGAATAGAAGTTCTAGGAAATTAACCAAAGTCAAGCTCAT
GGGTCGAGAACCAAGTGTGCATGAGAAAAATTGACAAGAAAAAATAAAAGACCCAAAGTTACCCTTGAACGCCTTATGGCCCAAGGTGCCAGGGCAATTT
TGGATCAGAACTGCAGAAATTATGGTCTTGGGAAATCCCTCTTGTGCAAGATCAATTTGGGCCATCTGTTGTTGAAATCAGTCTCAGGATTTTACTCTTA
GCACAGCGTGCTATGCTAATTTTGGGCATATGCGGTCCTGCTTTGGTTCATTAAGGTCATTTCTACACGGTATAAATACATGGGAAACACACTTTATCAA
AAAAAAAAAAAACATGGAAAGCACAACTTGGGAGGACTTTTGACCTAAGATGTAGAGAAAGGCTCCTCGCTTGGAGACATGAGGATTCGAAGAGTTGCCA
TCGATGATCAATTAAATATAATAGTTTGGATTGAGAAGTTGGTTGTAGTGTTTTCTAGGTTTTTATTCTTATTTGCAATGTACTTCTCTTCTACGAAGTA
ATTTTCTCATAAGACATAGATGGATATGGTATAATGATTATCACTTCCAGTTTTAAATTTTGTTGAATGCTTAGAACTTGTCTTGGATTTCTAAAGAAAT
TGTGGAGTAACGTTTATTGCATGTTTAATCAAAAGAGAAGTGTTTTGAATGAATATCTTTTGTAACAAACGCCCTTTTCAATCGTTTAGATTAGGCCCTC
GAAGACTCCCTAATTTTATCTTATTGCTTATTGTTCCCTTGGATGAAAAATCTTTTAAATGATGTTCCAATTGACCGATTGTCCAAGGGTCGGACTCTTA
ACATGTTCCACGGGTCTACCT
>LE_HBa0104J17_T7_33873 (trimmed for quality and cloning vector)
AGCTTCGAAGTCTGAATAGAAGTTCTAGGAAATTAACCAAAGTCAAGCTCATGGGTCGAGAACCAAGTGTGCATGAGAAAAATTGACAAGAAAAAATAAA
AGACCCAAAGTTACCCTTGAACGCCTTATGGCCCAAGGTGCCAGGGCAATTTTGGATCAGAACTGCAGAAATTATGGTCTTGGGAAATCCCTCTTGTGCA
AGATCAATTTGGGCCATCTGTTGTTGAAATCAGTCTCAGGATTTTACTCTTAGCACAGCGTGCTATGCTAATTTTGGGCATATGCGGTCCTGCTTTGGTT
CATTAAGGTCATTTCTACACGGTATAAATACATGGGAAACACACTTTATCAAAAAAAAAAAAAACATGGAAAGCACAACTTGGGAGGACTTTTGACCTAA
GATGTAGAGAAAGGCTCCTCGCTTGGAGACATGAGGATTCGAAGAGTTGCCATCGATGATCAATTAAATATAATAGTTTGGATTGAGAAGTTGGTTGTAG
TGTTTTCTAGGTTTTTATTCTTATTTGCAATGTACTTCTCTTCTACGAAGTAATTTTCTCATAAGACATAGATGGATATGGTATAATGATTATCACTTCC
AGTTTTAAATTTTGTTGAATGCTTAGAACTTGTCTTGGATTTCTAAAGAAATTGTGGAGTAACGTTTATTGCATGTTTAATCAAAAGAGAAGTGTTTTGA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.954091
Expected error %
0.297078
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0104J17
Clone
Clone name
hba-104j17
LE_HBa0104J17
P104J17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found