Clone Read LE_HBa0106B22_SP6_34266

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0106B22_SP6_34266
Primer
SP6
ID from Seq. Facility
LE_HBa_106_B22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
10 trimmed for vector and quality, 813 raw
Sequence
>LE_HBa0106B22_SP6_34266 (raw untrimmed)
TCCCCCCCCCTCCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCGGGCCGGTTGTGCCCCTCCCCCACCCACCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCATNGNGGNNNNTTTGAAAGNGTACCGCGCNTAGGTCCACTTCCTGCCCCGCCGCGTGCTCTTTGATCTCATCAGCGACGGCTAGGGGAC
GTTGAGTGCGCTACGNACGTCAGGTTTCGCTCTTGTCTCTTTTCATTTGATTTCTTTTTGTATGTTCTTGCGTGATAGGCCTGTACTCGATGTCTGTGTG
AGTTGACGAGCTAAATAGACAACGCGACCGTAAGACACGCACACCAGCGAATCAGGATAACCCCCGAGGCGCCGGGCTCAAAGCCCGCCGCGGACAGACG
ATTCGAAAACGGGAGACTTTTTGTTTTTTTTATTTTTAGCGTAGCAGGCAAACGAAGCAGTACCGGACATCGCACCCCAGATTCCCACACGGCGGCGCAC
ACCAGCACGGACAGACCAAACGCGCGGCGGGTAGGGCGACCGACCGAGACNCGCGTGCCGCACCGCCCCGCCGAGCGGGCCGCCGGGCGCCGGGGGGCGG
TGGGCGGCGTGGCTGGCAGACGGGTGATGCCGGACGGCGAGCGGGGGGCCCTCGGGGGAGACGGAGGACCGGCCCGCGCGGCCGCCCGTCGCCCCCGCGC
CGCGCGTCCGCCCGTGCGCTAACGCGGCGTCGCGAGGCGGGCCCCGCGCGGGCCGCCTCACCGCAGCGGCCAGAGTCCGGGACAAGGCCGGAGCTGCCGC
CGCGGGGCAACCG
>LE_HBa0106B22_SP6_34266 (trimmed for quality and cloning vector)
CCCCCCCCCC

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.339944
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0106B22
Clone
Clone name
hba-106b22
LE_HBa0106B22
P106B22
Clone type
BAC
Contamination
none
Estimated length
78,260
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found