Clone Read LE_HBa0106E17_SP6_34400

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0106E17_SP6_34400
Primer
SP6
ID from Seq. Facility
LE_HBa_106_E17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
734 trimmed for vector and quality, 886 raw
Sequence
>LE_HBa0106E17_SP6_34400 (raw untrimmed)
GCGGCGAGGATTGATAGTGGGATTGACCTCAGGAAGTGAGGACCTACCTAACTTGGATTATTAAGAATTACACGTCTTTTTCTAAGTAGTCTCCAAAATC
CCTTCAACGATCGGAACCTAAAATATTGGGAAAAAGGAAGAAATGGGGTTAGTACAAAACTTGTACAAAGTATGAGACCATATGCACATATAATATCAAA
TCATGCTACAAAAGGACATTTCATTAAGCAACGCAATTTACTTTGAAAAGATTTATGCACATTAAATAAGACCCTACAATCAATAAGAAATATTCCTTAA
GTTATAAGCACGTACATCACAATACCAACCATACAAAACATAATCAAGTCAATGAACATATCAACATACTTGCATATATAATCAAGTCCACTCTATCATC
AAGTTATAACTTCAACAAGCATGAATAAGAGTACATTTCAACATAATCAAAGCAAGACCATCATTCATGATCCTCTTTAAGTCCACTTGTACAATAACTA
AGAAAATCCCCATAAACTTACTTAATCAAGTAAACCTTTCAAGAACCATAGCCCATGTCCAGCTTCACATAACATAACATTAAGAGTACATAATATTATA
CTGTAGCAATTTACACCAAATACATGTTCATAAGAGTAATAAACATCACATTGTATCATTAACATGTAGATCATCATATACATATCATTTACATTGATAA
GCATATACATATATAAGAACATCCTCCTAAGACTTGCCTTAAGGCTAACAAGTGCAATGTATAGGTAGAGTCCCATATCCTTACCTAGACTAAGCTAACA
CACTTAGGTCATCTTAGTTAGAGTTAATTCCTTTAAATTATTTTTATCTTTTTGGGAACATCTTGACCACCTGAGCTAATGTGAAA
>LE_HBa0106E17_SP6_34400 (trimmed for quality and cloning vector)
GTGAGGACCTACCTAACTTGGATTATTAAGAATTACACGTCTTTTTCTAAGTAGTCTCCAAAATCCCTTCAACGATCGGAACCTAAAATATTGGGAAAAA
GGAAGAAATGGGGTTAGTACAAAACTTGTACAAAGTATGAGACCATATGCACATATAATATCAAATCATGCTACAAAAGGACATTTCATTAAGCAACGCA
ATTTACTTTGAAAAGATTTATGCACATTAAATAAGACCCTACAATCAATAAGAAATATTCCTTAAGTTATAAGCACGTACATCACAATACCAACCATACA
AAACATAATCAAGTCAATGAACATATCAACATACTTGCATATATAATCAAGTCCACTCTATCATCAAGTTATAACTTCAACAAGCATGAATAAGAGTACA
TTTCAACATAATCAAAGCAAGACCATCATTCATGATCCTCTTTAAGTCCACTTGTACAATAACTAAGAAAATCCCCATAAACTTACTTAATCAAGTAAAC
CTTTCAAGAACCATAGCCCATGTCCAGCTTCACATAACATAACATTAAGAGTACATAATATTATACTGTAGCAATTTACACCAAATACATGTTCATAAGA
GTAATAAACATCACATTGTATCATTAACATGTAGATCATCATATACATATCATTTACATTGATAAGCATATACATATATAAGAACATCCTCCTAAGACTT
GCCTTAAGGCTAACAAGTGCAATGTATAGGTAGA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.925476
Expected error %
0.156636
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0106E17
Clone
Clone name
hba-106e17
LE_HBa0106E17
C12HBa0106E17
P106E17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found