Clone Read LE_HBa0106E17_T7_34401

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0106E17_T7_34401
Primer
T7
ID from Seq. Facility
LE_HBa_106_E17-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
660 trimmed for vector and quality, 889 raw
Sequence
>LE_HBa0106E17_T7_34401 (raw untrimmed)
TAACCCTGGTACCGGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTACCATATACAAGTTGGTACGGGGACATACCTATGGGAGTCTTATAC
GTTGTCCGATAGGCCCAAAGAGCATCATCAAGCCTCCTTGACCAATCCATTCTACTAGCGTTAACTGTTTTTGACAATATCTGTTTGATCTCCCTATTTC
ACACTTCAACTTACCCACTAGTTTGAGGATGGTAAAAAGTGTCCACATTATGGCGAACCCCATATTTCTCTAATAATCCCTTGAACAATCTATTGCAAAA
GTGGGAGCCCCCATCACTAATAATTGCACTTGGTGTGCCAAAACGAGAGCATATATTCTTTTTTAAGAACACAGTGACACTCTTCCCTTCATTGTTTGTG
AGGGCAATAGCTTCCACCCATTTAGATACATAATCAACCGCTACTAAAATATACTTTATTCCATGAGAACTCACAAAATGACCCAAAAAGTCAATACCTC
AAACATCAAATAACTTAATCACAAGAATGGGGTTTAGAGGGAGCTCTTGCTTTCTAGAAATGCCGACATCTCTTTGGCAGCTATTACATGCTTTAGAAAA
CTTCATGAGCATCTAGATGAAGAGTTGGCCAATATTAACGACATTGTAATATCTTATGAGCGGTTCGGATCCACTATGATGTCCACCCAACGGGTGAGGA
ATGTAATTGTCTTCTGTACCACTCTACATTCTCTTTTTTTGTTCACTACCTCTCAAATAAGCCGGTTGTGACCACTTCTATATAATACCGGTTCTCCCAC
AGTACTTTTTGAACTCCATCGTGACCTTTCTACCTAAGTAAAGGTCTCATCTGATGAACTATTATTCGTGTCTCTAGAGTTGATATTCT
>LE_HBa0106E17_T7_34401 (trimmed for quality and cloning vector)
AGCTTTACCATATACAAGTTGGTACGGGGACATACCTATGGGAGTCTTATACGTTGTCCGATAGGCCCAAAGAGCATCATCAAGCCTCCTTGACCAATCC
ATTCTACTAGCGTTAACTGTTTTTGACAATATCTGTTTGATCTCCCTATTTCACACTTCAACTTACCCACTAGTTTGAGGATGGTAAAAAGTGTCCACAT
TATGGCGAACCCCATATTTCTCTAATAATCCCTTGAACAATCTATTGCAAAAGTGGGAGCCCCCATCACTAATAATTGCACTTGGTGTGCCAAAACGAGA
GCATATATTCTTTTTTAAGAACACAGTGACACTCTTCCCTTCATTGTTTGTGAGGGCAATAGCTTCCACCCATTTAGATACATAATCAACCGCTACTAAA
ATATACTTTATTCCATGAGAACTCACAAAATGACCCAAAAAGTCAATACCTCAAACATCAAATAACTTAATCACAAGAATGGGGTTTAGAGGGAGCTCTT
GCTTTCTAGAAATGCCGACATCTCTTTGGCAGCTATTACATGCTTTAGAAAACTTCATGAGCATCTAGATGAAGAGTTGGCCAATATTAACGACATTGTA
ATATCTTATGAGCGGTTCGGATCCACTATGATGTCCACCCAACGGGTGAGGAATGTAATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.973884
Expected error %
0.919967
Sequence Annotations 
Automatic Annotations
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF24529.1| Score 235 E Value 1e-62 Identity 61.60% Align. Length 654bp (99.09%) Frame 2
F7F22.15 [Arabidopsis thaliana]
NCBI NR non-redundant protein sequence database (genbank/nr)NCBI BLAST
gb|AAF24531.1| Score 233 E Value 4e-62 Identity 61.10% Align. Length 654bp (99.09%) Frame 2
F7F22.17 [Arabidopsis thaliana]
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0106E17
Clone
Clone name
hba-106e17
LE_HBa0106E17
C12HBa0106E17
P106E17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found