Clone Read LE_HBa0106F06_T7_34427

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0106F06_T7_34427
Primer
T7
ID from Seq. Facility
LE_HBa_106_F06-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
583 trimmed for vector and quality, 872 raw
Sequence
>LE_HBa0106F06_T7_34427 (raw untrimmed)
AGACCGGGTTCCCGGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTATCCAGTATTGGTTAGTTTCCGTTTTCGAGTAGGTATACACCTTTTAG
AGGGTCACAAATATCCCTTTGTATGAGGGTCACATGATATTCACATAAGTTCCTGGTATTACTGAAGTTCAATAATCATTTGGCTTGCAGAACTCCTTAT
CTTTATGATGGGGAGCCAAGGAGCAACGGTAAAGTTGTCTCCGTGACACCTATATGTCACGGGTTCGAGCCGTGGAAGCAGCCACTAATGCTTGTATTAG
GGTAGGCTATCTACATCACATCTTTTTGGGGGTACAGCCTTCCCCTGATTCGGCTTTAGCTGGATGATTTGGGTACCGCCGCACCGGGCTGCCGGTTTTA
GCTCCTTATCTTTATCTACCAGTTGTTTGTACTTCTGCTTAAAACAGGTTTGACTGTAATAATCCTTCAGTTGGGGCTAAAGGTGAAACAGAAGAAAATT
TTCTTTTTTTGGTTGCATGAATGATGTTTAACATAGCTGGTAATCAAGCGAATAATTTGCACATAAATGACCTTAACTCTATCATATATGGTGAACTTTA
AATTTCGTAATATTGCATACCTGAAAGATTGTCTCAAATTTACAACATGAGAAAGAATAGCCTCTGTATCCATAGTTATGTGAACGCTTGTTGTTTGTCC
CATGTTTTCTTTTGCCTCCGTTGGAAGCTATGTGGAAATATTACCATCTAGCACAGGACTTTGTAATGGAAGATATTACAATTATTTAAACTTATTCTCA
CCCCCCTATTTCGCCACATTTTAAGACCCCACTGCATACCTCATTGTGTACAACGGATTAGTAGGGTAGAAG
>LE_HBa0106F06_T7_34427 (trimmed for quality and cloning vector)
AGCTTATCCAGTATTGGTTAGTTTCCGTTTTCGAGTAGGTATACACCTTTTAGAGGGTCACAAATATCCCTTTGTATGAGGGTCACATGATATTCACATA
AGTTCCTGGTATTACTGAAGTTCAATAATCATTTGGCTTGCAGAACTCCTTATCTTTATGATGGGGAGCCAAGGAGCAACGGTAAAGTTGTCTCCGTGAC
ACCTATATGTCACGGGTTCGAGCCGTGGAAGCAGCCACTAATGCTTGTATTAGGGTAGGCTATCTACATCACATCTTTTTGGGGGTACAGCCTTCCCCTG
ATTCGGCTTTAGCTGGATGATTTGGGTACCGCCGCACCGGGCTGCCGGTTTTAGCTCCTTATCTTTATCTACCAGTTGTTTGTACTTCTGCTTAAAACAG
GTTTGACTGTAATAATCCTTCAGTTGGGGCTAAAGGTGAAACAGAAGAAAATTTTCTTTTTTTGGTTGCATGAATGATGTTTAACATAGCTGGTAATCAA
GCGAATAATTTGCACATAAATGACCTTAACTCTATCATATATGGTGAACTTTAAATTTCGTAATATTGCATACCTGAAAGATT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.971581
Expected error %
1.20363
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0106F06
Clone
Clone name
hba-106f6
LE_HBa0106F06
C07HBa0106F06
P106F06
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found