Clone Read LE_HBa0111D21_SP6_35896

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111D21_SP6_35896
Primer
SP6
ID from Seq. Facility
LE_HBa_111_D21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
188 trimmed for vector and quality, 791 raw
Sequence
>LE_HBa0111D21_SP6_35896 (raw untrimmed)
AAGAGATATATTAGCCTTTCATATACTTTAAGTNGTTTCACCATCTAGCAGGTAATTATATCTTCTTTTGTATTTCCATTATTTTTCTGCTTGAGCTGAT
TATTCAGTTTCTCTTGTGAACATTTGAATTTTTCTTTCTATTAATACAGCGTCACTGTTGCTCTCCTTTGGTGTGTGCGCGCTTTCCCAGTGGCCCCAAA
ATTAGGTCAAATTTCCTGGAGTGGTGTAGGGTAGGTTGAAAGGGAGCACTCCCAGTACAATCTGATCTGATGCCGCGTACCTAAGCCACCTCCTACACCC
GCCAACACTCGCTGACCCTAACCTCATTGGGGCCCTCTATAAAATCACTTCATATAATTATATTCTATACCACTTTTTTAATCCTTCACCTTCCTTCTTT
CTTCTTCCATTTCCTCCTCTTAGTATATCATTAAATGTAAACTCTCTTTATAATTATCAACATTTCTTATATTTTTGCTCTCACATATTCTTCATGTATT
CTTCGATTCTTTATATCTCTTTTATATTTGCTATTTACTATTTTTCCTCTTTCATTTTTGCTCTTCTTTTGATTCCTCTTTTTTATTCTTTTTTTTTATA
TTATGTTTTATACATCTCACAATTTCTCATTATCTCCCCTGATTTTATTATCATTTATTATCTTACCTTTTTTCTATAATTCAAATCATATCATTACATT
TTAAATTATAATATCTGTCATCTTTAGTTCTTCAAATGTATGCCTCTTAGTGCTTTCATTACGCTCTTTTCTTTATTCTTTTCTTCCCGCC
>LE_HBa0111D21_SP6_35896 (trimmed for quality and cloning vector)
GGTAATTATATCTTCTTTTGTATTTCCATTATTTTTCTGCTTGAGCTGATTATTCAGTTTCTCTTGTGAACATTTGAATTTTTCTTTCTATTAATACAGC
GTCACTGTTGCTCTCCTTTGGTGTGTGCGCGCTTTCCCAGTGGCCCCAAAATTAGGTCAAATTTCCTGGAGTGGTGTAGGGTAGGTTG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.89891
Expected error %
0.0838952
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111D21
Clone
Clone name
hba-111d21
LE_HBa0111D21
C01HBa0111D21
P111D21
Clone type
BAC
Contamination
none
Estimated length
130,233
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found