Clone Read LE_HBa0201O12_SP6_360490

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0201O12_SP6_360490
Primer
SP6
ID from Seq. Facility
LE_HBa_201_O12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
796 trimmed for vector and quality, 893 raw
Sequence
>LE_HBa0201O12_SP6_360490 (raw untrimmed)
NNNAATCGTTGANGNATGCGGTGTTTGGAGATGAAAATCCCAGTGAAGGATACTGCTTCAAGTATTTAAGGCACTTGGTAAGCTGCCTTCAAGTGTGGTT
CTCTAGGAGTTTGCTTAAACTGACTGAGATAATGTACACTATAAGATATATCTATCTTTGTAGTTGTGAGAAAATTAAGTTTTCCTACTAACTTTCTATA
AAGAGTTGGATCAGTCAACAACTTGCCATCAGTGGCCTTCAATTTTTCAGTACAATCAAATGGTGATGAAACAATCTTCTAATTCAAAAAATCAAATTCC
TTCAAAAGATTCGTGATGAACTTCCTTTGTGAAATCAAAAGACATCATGCCTATACAGTATCTCCAACCCCAGGAAATAAGTAATTTGCCCAAATCTTTT
ATTTTGAACTGATCATGCAGAAAAGACATCAAGGATTCAATTTCTTCTAGGTCAGTTCCAGTCAAGATTACATCATCAACATATACTGCAACAAAAACGA
AAGAATAGTATCTTGTTCTTATATAAAACAGTGAATAGTCACTGTTTGAGTGTGTGTATCCTCTATAACAAAGAATACTTGCCAACTTGCCATACCACTG
TCTACTAGACTGTTTCAAGCCATACAATGATTTTTTCAATTTACACACCATGTTAATACCATCTACACTAAGACCTTGTGGTAATGTCATATATACCATC
TAGACTAAGACCTTGTGGTAATGTCATAAAAACTTCCTCTTTCGAATCACCATGAAGGAAGGCATTATTGACATTTAGTTGATACAAGTTCCAGCCTTTC
TTAACAGCCAAAGTGATTAATGTCCTAACAATGGTAATCTTAACCACAGGAGAAAAGTCTCAGCGTAGTCTATTCCAGCTTATTGAGTGTATN
>LE_HBa0201O12_SP6_360490 (trimmed for quality and cloning vector)
GGAGATGAAAATCCCAGTGAAGGATACTGCTTCAAGTATTTAAGGCACTTGGTAAGCTGCCTTCAAGTGTGGTTCTCTAGGAGTTTGCTTAAACTGACTG
AGATAATGTACACTATAAGATATATCTATCTTTGTAGTTGTGAGAAAATTAAGTTTTCCTACTAACTTTCTATAAAGAGTTGGATCAGTCAACAACTTGC
CATCAGTGGCCTTCAATTTTTCAGTACAATCAAATGGTGATGAAACAATCTTCTAATTCAAAAAATCAAATTCCTTCAAAAGATTCGTGATGAACTTCCT
TTGTGAAATCAAAAGACATCATGCCTATACAGTATCTCCAACCCCAGGAAATAAGTAATTTGCCCAAATCTTTTATTTTGAACTGATCATGCAGAAAAGA
CATCAAGGATTCAATTTCTTCTAGGTCAGTTCCAGTCAAGATTACATCATCAACATATACTGCAACAAAAACGAAAGAATAGTATCTTGTTCTTATATAA
AACAGTGAATAGTCACTGTTTGAGTGTGTGTATCCTCTATAACAAAGAATACTTGCCAACTTGCCATACCACTGTCTACTAGACTGTTTCAAGCCATACA
ATGATTTTTTCAATTTACACACCATGTTAATACCATCTACACTAAGACCTTGTGGTAATGTCATATATACCATCTAGACTAAGACCTTGTGGTAATGTCA
TAAAAACTTCCTCTTTCGAATCACCATGAAGGAAGGCATTATTGACATTTAGTTGATACAAGTTCCAGCCTTTCTTAACAGCCAAAGTGATTAATG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944001
Expected error %
0.35345
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0201O12
Clone
Clone name
hba-201o12
LE_HBa0201O12
C12HBa0201O12
P201O12
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found