Clone Read LE_HBa0111H20_T7_36087

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111H20_T7_36087
Primer
T7
ID from Seq. Facility
LE_HBa_111_H20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
128 trimmed for vector and quality, 796 raw
Sequence
>LE_HBa0111H20_T7_36087 (raw untrimmed)
TTTTTTATGACCGAATTCCCTCCAAAGAGAATTAGTACCCCAAAGGTCTAACCTTCGAACGCATCAAACCAACCAATGGGGGGACCTACATCTCCTACCA
TACAATGCTTCAAATGGTGCCATATCAATGCTTGAGTGATATCTATTATTGTATGAAAATTCCCCTAAGGGTAAGATTTTTTTCTTTTTTTTTTTTTTTT
TTTTTTCCACATGCGCGAAGCATCTCCTCCAACACTTGAATCATTCGCTCAGATTGACCATCAGTCTGAGGATGCAACGCGGTACTAAGCTCCAACCTAC
TACCTACTTCATCATGCAATGTTCTCCAAAACTTGGAAGTAAACTGCGTACCTCTATCTGATATGATGGATAGTGGAACCCCATGCAACCTATAAATTAT
TGATATATAGATTTTTTCTTACTCCTTTTCTTTGTTAATTTACCTCGACCCAATATTTATGATCATATCTCCGCCCCCCGAAGATATAATATTTGAGTAC
GGAATTGTTTTTTATTTTATATTCTTTGAAAAAGTATATCAAGAAGTTGTAGAGTGTAGTATAATGGATTGATAAATTTTTGATTTTGTTTTTTATTAGT
ATGTTTTTTATTTTGGTCATTATTTGGATTCATTAAATTGCGTAGCTTAACGTGTTTCGTGCCTTCTCTTCGTCTCCAATCCAAACTATAATCTCCTGAT
TCCTATTTCTATTTATTACTATTCTTCAACTTATAATACACTTCTCCCCTCCCTCTCTTCCTCTCTCCCCCGCTATCTATATTTAATTCATTCAAT
>LE_HBa0111H20_T7_36087 (trimmed for quality and cloning vector)
AGTACCCCAAAGGTCTAACCTTCGAACGCATCAAACCAACCAATGGGGGGACCTACATCTCCTACCATACAATGCTTCAAATGGTGCCATATCAATGCTT
GAGTGATATCTATTATTGTATGAAAATT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.955141
Expected error %
1.75639
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111H20
Clone
Clone name
hba-111h20
LE_HBa0111H20
P111H20
Clone type
BAC
Contamination
none
Estimated length
107,190
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found