Clone Read LE_HBa0111J11_T7_36165

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0111J11_T7_36165
Primer
T7
ID from Seq. Facility
LE_HBa_111_J11-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
82 trimmed for vector and quality, 794 raw
Sequence
>LE_HBa0111J11_T7_36165 (raw untrimmed)
CATTTACGGTAGATATCTCTCACAAACTCAGTTGCCTAAGCATCAATTTCATGTATTGCACACCAAGCTAGGTGTTGTCCGAAATCCCCGCACTAGCTGG
GGGGGGGGGTGATATACTCCCACACACTTCATAAAATAATTTTCCTCACTCCTTTCTCTCTACTCTACTCTCTTTCTCACTCCAATATATTTTTTTTTTC
CTATAATCCTAATGTCTATTTCCTCTCCTCTTACCCCTCTATCCCCTCCCTTCTCTCCCACACCTCAATTTCATAACATTCAACTACATATCCCATTAAA
CTAATTTCATATATTCATAGCTATAATTTTATTTTCATATCTCTTTCACTTTTCAATATACTTTTTCTTATCTTAATTCTTTCTTCTATTCAATCTTTAC
ATCATTTGCCTTTATACNATCTTTTTTTTCTACACCATTACATACAATCCCATCTCATCTTACAAACTAACAAACGTTACTACAACACCAATCTTATTCA
CATTCTTACTATATACTCTTCTCTACTCCATTATTCTCAATCTTGTCTTCCCCCTTTTTCTTACAATCTCTACCTTGTATATCTCCTAACCCCTCATCTT
CTGGCTTTTGCCGGCTGTATGCGTCTCCTCTGCCGCGCTTCCCTGCGCTACCTCCATCCTTTACTCTTCCTCACCCACCATCTAGACACGCATCTGTGCT
GTCATACAAGCGTGCTGATCTTAGATGTGAATACAATGGTTATAATCAAATCTCTATAGTATGCTTTATGCCATATAAGTGATCATTAGTTTCT
>LE_HBa0111J11_T7_36165 (trimmed for quality and cloning vector)
GTTGCCTAAGCATCAATTTCATGTATTGCACACCAAGCTAGGTGTTGTCCGAAATCCCCGCACTAGCTGGGGGGGGGGGTGA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.938324
Expected error %
0.0362588
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0111J11
Clone
Clone name
hba-111j11
LE_HBa0111J11
P111J11
Clone type
BAC
Contamination
none
Estimated length
110,736
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found