Clone Read LE_HBa0008L19_SP6_3636

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0008L19_SP6_3636
Primer
SP6
ID from Seq. Facility
LE_HBa_008_L19-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
625 trimmed for vector and quality, 988 raw
Genbank Accession
Sequence
>LE_HBa0008L19_SP6_3636 (raw untrimmed)
AAAGAAAAAATGGATTCNNGCTGCTATGTGATAANACNNNNNNANGACAANGCNACAAGAAATCACAATTNAGGTTCTCNGTCTGATCCAACATCCAGAA
CTGAGAACAGCAAATCCTGGACAACATCTGCATATCCAAGTACTTCATATGGAAAATATAATGCTTCCTCATTCTCATATATGTCAACAACTTTTCGACA
GAATTCATGTATCCACTGTAGTGCTACTGTTTTAACTGCCAGAGGAGAAGCGACATGAAGAGCTCTTATGAGAAGGATAGCGTACATTTTCAGATGCTGT
AAGACTAGCCCAGGAAGTTCAATCCTCCCACTCTCAACCTTTTCGAGTTTCTCAGGTGTTGCTTGCTGCGAAATTGTGGCACTAACTTGTTTGCTTAGAG
AGCATTTGCTTAAGAATTCAAATGCAGCTAGTCTTTCTAACGTCTTGAGAACTGTGACTTGCAATTCTACATGCCCAAGGACAGGTAACTCAAAAGGGTT
GAAATTGCCAATAATGCTTGATATTAACTTTCCAGACCTGTTAAGATACAGAGTGTAGATTTCTGCTTGGCCAATCATGCTAGTAGCTCCACTGCCTAAA
GAAACACAACTAAGTAAGACCGCCAAATCAAACTGAACCAATGCAAATAGCTCAGATCTCGAGTAAGATTTAAGAATTTTGACATCATATCCCAGATTCT
GCAGGTCTGATTTTTGTCTGAGCATACACCTCAACAAATCCCACTCCTCAGCAGTACAATTACTGATTTTTTCACAACCTCCAAGTTTCCATGTTGAAGC
AAAAATTGTAAATAACCTGCTGAAACTCCCGGTACTAATGGGTTGGAAGCAAACCCACTGAAAATAAGCCCTCAATTGAAAATCTGTGAAAGAGAAGGAA
AAAGGCACCCTTTTCAGGGCACATTTGCAATTGTTTTAAGAATTCTTACCCGAAAGGAACAATCTTTCTCAACAAGGAGGTCTATTAA
>LE_HBa0008L19_SP6_3636 (trimmed for quality and cloning vector)
CATCCAGAACTGAGAACAGCAAATCCTGGACAACATCTGCATATCCAAGTACTTCATATGGAAAATATAATGCTTCCTCATTCTCATATATGTCAACAAC
TTTTCGACAGAATTCATGTATCCACTGTAGTGCTACTGTTTTAACTGCCAGAGGAGAAGCGACATGAAGAGCTCTTATGAGAAGGATAGCGTACATTTTC
AGATGCTGTAAGACTAGCCCAGGAAGTTCAATCCTCCCACTCTCAACCTTTTCGAGTTTCTCAGGTGTTGCTTGCTGCGAAATTGTGGCACTAACTTGTT
TGCTTAGAGAGCATTTGCTTAAGAATTCAAATGCAGCTAGTCTTTCTAACGTCTTGAGAACTGTGACTTGCAATTCTACATGCCCAAGGACAGGTAACTC
AAAAGGGTTGAAATTGCCAATAATGCTTGATATTAACTTTCCAGACCTGTTAAGATACAGAGTGTAGATTTCTGCTTGGCCAATCATGCTAGTAGCTCCA
CTGCCTAAAGAAACACAACTAAGTAAGACCGCCAAATCAAACTGAACCAATGCAAATAGCTCAGATCTCGAGTAAGATTTAAGAATTTTGACATCATATC
CCAGATTCTGCAGGTCTGATTTTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.963768
Expected error %
0.252701
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0008L19
Clone
Clone name
hba-8l19
LE_HBa0008L19
C01HBa0008L19
P008L19
Clone type
BAC
Contamination
none
Estimated length
129,945
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found