Clone Read LE_HBa0112A05_T7_36489

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0112A05_T7_36489
Primer
T7
ID from Seq. Facility
LE_HBa_112_A05-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
453 trimmed for vector and quality, 860 raw
Sequence
>LE_HBa0112A05_T7_36489 (raw untrimmed)
TCTAACCTCCCCACCGCGGGGTCCTCTAGAGTCGACCTGCAGGCATGCAAGCTTTTATGATGCCATTTCCCATTACCCTTTATTGAATGCTATGGTGATT
GAAGGACCTTGAAAATCCCTTCTTGGTGAAGATACTTTAAGCCTTTCCAATTGATATCCGTAATTCCCCCAGTTTGTACTGCCTGGCCATGGGCCTGTTC
CGATCCACTTCTCTGGAAAATGCTGGACTCCGTATTGCAATCCAATTTGATCCGATTCCCCAGGAAGGTCGTCCCGTCCGTCTCAAGAAAAATTAACCCC
CCTCCTAAATATTTGCTTGAACTTTTGTCGTGGAAACCTACCAACCTTGATTTTCCCTCACTATATGCATGTTAACCACCATCAGTTGAGTTTTACTGCC
GAGAGGTGATTTCCCCCTCTTAACTTTCCTCTTTCTGTAGTATTGTAATTGTAACTTCAATCAACAAACCCATACGGCAAGCCTCCCTTTCCCAAATATC
AGATCGCCCCTCAATTCCCCAATGCCCTTACGGAAGACCCCACCTCTCATTAGATCTCCCCTCTTTCCAGTCTCCACCTCTCAATCCGCTGCTATCCTCC
TCCTCAACCCAATACCACTCCGTGCTCACCTCATCCCCATCCCCCCCTGCAAAGATCCCGACTCCCCTGATGCCACTCCTCACAATTCTCCCTATCTCTT
CGCTCCCCGCCACCTATTTTCCGGACCTTCACCCATCTTCTTCCACCCTCCCCCCACGCCCCCGCAGCAGCACTCCCATCCCCGCCCCCTCCCCCGTGTC
ACCCGCCCCCTGACCTGACCTACCAATCCTCCCACTTCCCGCCTCACGATCTCTTCCTCC
>LE_HBa0112A05_T7_36489 (trimmed for quality and cloning vector)
AGCTTTTATGATGCCATTTCCCATTACCCTTTATTGAATGCTATGGTGATTGAAGGACCTTGAAAATCCCTTCTTGGTGAAGATACTTTAAGCCTTTCCA
ATTGATATCCGTAATTCCCCCAGTTTGTACTGCCTGGCCATGGGCCTGTTCCGATCCACTTCTCTGGAAAATGCTGGACTCCGTATTGCAATCCAATTTG
ATCCGATTCCCCAGGAAGGTCGTCCCGTCCGTCTCAAGAAAAATTAACCCCCCTCCTAAATATTTGCTTGAACTTTTGTCGTGGAAACCTACCAACCTTG
ATTTTCCCTCACTATATGCATGTTAACCACCATCAGTTGAGTTTTACTGCCGAGAGGTGATTTCCCCCTCTTAACTTTCCTCTTTCTGTAGTATTGTAAT
TGTAACTTCAATCAACAAACCCATACGGCAAGCCTCCCTTTCCCAAATATCAG

This is probably not a useful sequence.

Problems:
  • High predicted error rate
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
5' read, flanking vector found
Quality trim threshold
12.5
Sequence entropy
0.94661
Expected error %
5.1622
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0112A05
Clone
Clone name
hba-112a5
LE_HBa0112A05
P112A05
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found