Clone Read LE_HBa0112C20_T7_36615

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0112C20_T7_36615
Primer
T7
ID from Seq. Facility
LE_HBa_112_C20-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
5 trimmed for vector and quality, 836 raw
Sequence
>LE_HBa0112C20_T7_36615 (raw untrimmed)
TTTCTTCTTGGCTAGACAGCTCATCTAACGAATGACGGCGATGCATAGGGAGTTTTCACACCTAGGCGTAGTACTCCAAAGGAGGAATGCTGGTTCGCAG
GGTTTCCCAACAATATAAAATATAAAATATGGCATAGTCCAATCTATCTCATATCAATAGACTTGGATACAATCGAGTAGTCATACCACACATACATATA
ATTTACCCATGTGTTGTGGACAGACACTTGGTCCATGATCC
AAAACGCCTCTCTGATTCGTCATACAGAGGAGTGTTAATCTGTCAACCGGCAGCCAGCA
AGACGGACTTGTCGTATTTAGCGTGAACACGGCTATTCCCTCCCACTGATATACCATGGACTTTACCATTCATCCTACATCACCTATAGATAGAGAATCT
TTGATCCACGAACACTGTGACGATTTGACATCGCCGAGCTGATGAACCATCCGGTTACATGATCTGCGAGTGTACATCTTATGTCAAGAGATATAATTGG
TTATTAACGACGTTGATTTGCGTTATCTGATGGATATTCACCATTTTCTCACCTCTTACCTTCTCCCCTCTCTCTCTCTCCGTTCTTCTCTTCTCAACAT
CATCTCTCTCCTCCTTCTGGCCCACGCCGACAACATCCCAAGAGATCATATCCTCACCAGTGCTACCTCAACACAGGACTTATCACCTCCTCATCTTCAA
TAGTAATAACAGTCATCTCTATCTCGCAAACCACACATCTATCTCGCGCCATACTTTTTTATTTTTTACTGCGTGTACTCTCTATCAACATCTCGCTCTG
TTATATGTCCGTCTACCTCTATCGTCCCCTCTCTCC
>LE_HBa0112C20_T7_36615 (trimmed for quality and cloning vector)
AAAAC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.901664
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0112C20
Clone
Clone name
hba-112c20
LE_HBa0112C20
P112C20
Clone type
BAC
Contamination
none
Estimated length
129,480
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found