Clone Read LE_HBa0203L19_T7_368425

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0203L19_T7_368425
Primer
T7
ID from Seq. Facility
LE_HBa_203_L19-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
11 trimmed for vector and quality, 1088 raw
Sequence
>LE_HBa0203L19_T7_368425 (raw untrimmed)
NGGCAAACCGGGNNACAGGGGGGGGGNAACTCCNTCCTTAGCAAGNTTCGNAACCCTTTNCCAGGGGCCAAATGGGCAAAGNCCNTTTTTCACNCAAAAC
NCNCNTAANTCNCNCAANTNTNTAACNTGCCCANCATTTATAGAGGGGGTNTCNNANNANNGNAGNNCGNGNNANTNNANANNAGNNNNNTGGNNNGNCC
GCTCATAAAAAGAGAGGTGNNCAGNNTTNGNNGAAAACCCAANANTGAATCNTGGNTCGAAATAATGGNNCCTACNNATCATTGGNTCAACNTGGNNTCT
TAGGGGAATTCCACTACCACTGAATATATACAATTNNTTTCGTTGGTTTCAANATTCCTCGAATAATCNNTCAACTGGCTCNNCACGCATTGGTACCGGN
NTCTCCTCCTAATGAATGGGTAAAGCTGGGCTCAATAAAAAACAATGGCAACAAAACCACAAACAAAGTTCCCAATCACTTAGAATAACCGAAATACATA
AACTCTTTGAAAAGATGAAACCAAACCCTCTTGGCTACAATAACATTCAAAAAAAATTTAATAATAAATGGCTTAATGCCTTTTAGGCCCAATCCTAATA
AAAATGGACCCAAAAACAAACCATTATCGGGCCTAAGCCTTAATGTGGAATTCGAAAACTCTCTCCAAAAAAAATGGGGAACCGGGGCACCCCGGGGGTT
CAAAAACCCCCCCCAAAAAAAAGTGGAAATGCGGAAAAAAAGTAACCCCCAAGGGTTCTTTTTTTTGTGGGGGGAGAGTTCCGGAAACAAAAAAATTTTG
GCCCAAGGAATTTAACCTGTGGGAGGAAAAAAAAAAGGGAAATGGAGAAAGGGTCCCCCCAAGGGTTACCAAAACCCCCAAAAAAACCGGGGGGGGGTCC
GGGTGTTTTATACAAATATTTCCCTTTTGGGGGAGAGGGGTGAAAAACCCTGGGCCCCCCCCTAAAAAAAAATAAAAAAGGAAAGGCTTCCCCGGGGGAA
AAAAAAATGGGGCCACACAAGGGGGGGGCCAAAAGGGGGGAA
AAAAAAAAAAAAACACCCGGGGACCAACGGGAGAAAAAAAATACCG
>LE_HBa0203L19_T7_368425 (trimmed for quality and cloning vector)
AAAAAAAAAAA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for contaminants
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.187735
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0203L19
Clone
Clone name
hba-203l19
LE_HBa0203L19
C04HBa0203L19
P203L19
Clone type
BAC
Contamination
none
Estimated length
133,881
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found