Clone Read LE_HBa0206D01_T7_369541

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0206D01_T7_369541
Primer
T7
ID from Seq. Facility
LE_HBa_206_D01-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1515 raw
Sequence
>LE_HBa0206D01_T7_369541 (raw untrimmed)
GCGTACCTGGGCGGGACATGTGCCAAAGCCTTTGCAATCAATTGGGAAGGGTGCATAGGAAGGCTCCTCTTACTTGTTCAGCGCCGACTAGTAAAAAGGG
TGTGAATATTCTCGTGGTGAACTAGTGTCGTGCACTCTTGTACCAAGTGAACGCTACTCGACAGAGAACAATAGCATATGTCATTTGGGTTAATTCCTAC
GAAATACAGCAAGAACCGCAGCGGTTGAAGAGT
ATGGCCCTTCCTAACTGTAGAGAAAATCTACACAACGGAGTTGGCGCGGCATTTGGAATAGATATGT
GTTTCACACGACATGGTGCAATTCGTCTGTCGTGATGTCATGGATAGAAGGCAGTGATCTTGTATTGAGTACGTAACTGGAAAAGTATGACATATGGATA
TGAGAGACTATCTCATGAAGGCGTATGTGCTACTGATAAGAACTAACGAGTTATCCTCTGTCTTGTATCTGAGCTTTAATTAATAATGATATTGTGCGGT
TGCTGACTTTGTGATAACTGGAAACTGAAGTAACATATCCCAGGTTTTGTCCTTGCTGTGTGTGAGCATCAAAACAGCGTATTGACGAACAATTGATTAT
TCATAAGGCATCAGCTATATGACTGAGGCAACTATTGCCATCCATTGTTGGCGTTTCTACCGCTCCACATTTATCGTCCATTGTGTCATATAAGACACTC
TGAGAACATTCTATGAGAATTTAATCCTCTCTGGAACCCAGTGGTTCTCTTGGCTTTTATAAATCGTGCACACTCGACTCTATAACTTTTTTGGGGAAGG
GCATGGTATTCTTCGAGCGCAAAGACTGGTAGTAACTTGTGGGATAAACAATTCCTTTGTATTCCAAATCACCTCGCCGCTCAAAGGAGATTCCCGTCCT
GCCTTCTATCCCCACAATTACCTTGGGGCTATTTGGCGTGTGAATCTATCTGTAATAAGGACTGACCCATCTCTTGGCCCTTAAAATTGTGGTTCTTATT
CATTGGCACTCCCAGAAGGAACACTAATCCTGACGTGCCTTCTTTCTCTACTTGCCTGCAGAAATATCCGTGGGACTCTTGGCTCGTTCTCCTGGGAACA
ATCATCTTACATAGGAATGACGACAGTGGTCAGGATTGCATCCGTCAAATTTCTGCTCGAACAATTTCATCTGCGATATGTCACGCGTTCTCTCTACTCT
TGGGCATCTGAAATGCAAATTCTAGGCTCTCCTTCTTCAATAGAATTGGAGGCCTTTCTTGCACGTCTCTCCTTCCACTGGCATAAACACGATTCACTTC
TCTTGTCGCTTTCCATGCAACTCTTCTTGCAATTCTAAACTTCTCCCAACACCTGGGCTTTCACTTCTAACGAACACATGTCTTTTCTATGTTCTGGCGC
CAATCGGTGCGTATCTTGTTGTATATACCACTCCTCCTCTCTTTCNACAGGGTTCGTTATCCCCTACTGTGTACTCTATGACCTTTTTTCGCGGTGTTCG
CCAATATATATCACG
>LE_HBa0206D01_T7_369541 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.73925
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0206D01
Clone
Clone name
hba-206d1
LE_HBa0206D01
P206D01
Clone type
BAC
Contamination
none
Estimated length
87,477
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found