Clone Read LE_HBa0208C24_SP6_371003

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0208C24_SP6_371003
Primer
SP6
ID from Seq. Facility
LE_HBa_208_C24-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
555 trimmed for vector and quality, 959 raw
Sequence
>LE_HBa0208C24_SP6_371003 (raw untrimmed)
NGGGCACTTGTTCTTTTGGAAACTACGGTTACTTTGTAATAAACGAGCAATCAAACTGAAACAACAGCCTTTATGGTGTTTTCTCGAAAAATCCTGATAA
TGGAAGTTTCCTTACTCTCTAAAACCTCTTATTGTTATCCGTGATTATCATAAACAGTTCAAACCATAAGCATAATGTTTACAGTCGACAATAACAAAAT
TGCGAACCTATCTTAATCACTTACACTTTTCTGTCACGACCACATTGAAGTTGCTGTCTATTCAACAGAGAATTGCAGCAAAATTTTCCTTTTACTAACT
GAGCTAAGAGCTGTAACACCTTACGTATTGTTATCAAAAATCCTGACAAAGAAGAGGATAAGTGAAAATTGTAATCGTATACCATTCATTACAATGTTTA
TCTTGTTTTGTATGGTTACCAGTCTCTGTCGAACCCATAGCTCCACCCATGTATGAGAAGAACTAGAACTGAAATACACATACGTCATTTAATCAGTAGT
AATAACAACATAAAAAATTACGCAAACAAATTTCACTCCCCAAAGTATCCCCTGGTTCTTATACATTTTACATTGCATTTACTGTTTTCTCTAATCATTC
GCGTCCAGAAATTTCCAATAATTGTGTCGTGTTTTGCATTCTGTCTAGGTATCCCAAGTGAAACGAACATCATTATAAGCTCCTAGGGCATTTCCCCCTC
GACCGAAACCCAGAGAGATGGTGATTAATTGCTGGTATATTAAGAAACCCAACTTTAAACCCAGTGGCACCTTTTAAAGTTTTGTGGTACCTTGGACCCC
AAAATCCAACAAATACAACCTTAAAACTCCCTAAGCCCGGGGGTACAATTCCCACTTTAAAAAAACCTACCCCCTTGGGACCCTTCTAAAAATTTTTCCC
CTTCCCCAAAAAACCCTTTAAACCCTTTGTCAAATATCCCTAAAAATGTGAAAAAATAT
>LE_HBa0208C24_SP6_371003 (trimmed for quality and cloning vector)
AAACGAGCAATCAAACTGAAACAACAGCCTTTATGGTGTTTTCTCGAAAAATCCTGATAATGGAAGTTTCCTTACTCTCTAAAACCTCTTATTGTTATCC
GTGATTATCATAAACAGTTCAAACCATAAGCATAATGTTTACAGTCGACAATAACAAAATTGCGAACCTATCTTAATCACTTACACTTTTCTGTCACGAC
CACATTGAAGTTGCTGTCTATTCAACAGAGAATTGCAGCAAAATTTTCCTTTTACTAACTGAGCTAAGAGCTGTAACACCTTACGTATTGTTATCAAAAA
TCCTGACAAAGAAGAGGATAAGTGAAAATTGTAATCGTATACCATTCATTACAATGTTTATCTTGTTTTGTATGGTTACCAGTCTCTGTCGAACCCATAG
CTCCACCCATGTATGAGAAGAACTAGAACTGAAATACACATACGTCATTTAATCAGTAGTAATAACAACATAAAAAATTACGCAAACAAATTTCACTCCC
CAAAGTATCCCCTGGTTCTTATACATTTTACATTGCATTTACTGTTTTCTCTAAT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.94158
Expected error %
0.609249
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0208C24
Clone
Clone name
hba-208c24
LE_HBa0208C24
P208C24
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found