Clone Read LE_HBa0208N16_SP6_371259

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0208N16_SP6_371259
Primer
SP6
ID from Seq. Facility
LE_HBa_208_N16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
692 trimmed for vector and quality, 1003 raw
Sequence
>LE_HBa0208N16_SP6_371259 (raw untrimmed)
GGGGNCCGTTGCAGTTCCTAGTGGAGTTTTTGCTGATGTAGTGTCCTTCTTGGGAAACGTGGTTTCTACGGATGGAGTGATGGTGGATCCTTCTAAGATT
GAGACAGTGAAGAATTGGGTAAGACCTACTAATGTGTCAGAAATAAGGAGCTTTGTTGGGTTAGCTAGCTACTACCGCCGATTCGTCAAGGGATTCTCTT
CTATCGCTTCCCAATTGACGAACTTGACTAAGCAGAATGTCCCATTTGTATGGTCGGATAAATGTGAGGAAAGCTCTCAGAAGCTCAAGACTTTGTTGAC
TACCGCACCTATCCTTACCTTGCCAGTAGAGGGTAAGAACTTCATTGTTTATTGTGATGCATCCTATTCTGGTTTGGGTGCAGTACTAATGCAAGAGAAG
AGTGTGATTGCTTATGCTTCAAGACAATTAGAAGTGCATGAACGTAACTATCCCACTCATGATTTGGAATTGGTCGCGGTAGTGTTTGCATTAAAACAAT
GGAGACACTATTTATATGGGGTTAAGTGTGAGATCTATACGGATCATCGTAGCCTTCAGTATGTCTTTACTCAGAAAGATTTGAACTTAAGACAAAGGAG
ATGGATGGAGTTACTAAAGGACTACGATATCACTATCTTGTATCATCCGGGGAAGGCGAATATTGTAGCGGATGCTTTAAGTAGGAAGGCGGGAAGCATG
GGAAGTCTAGCTCACTTGCAAGCTTCTAGACGCCCATTAGCTAGAGAGGTTCAGACTCTAGCTAATGACTTGATGAGATTAGAAGTAAATGAAAAAGGGA
GATTGTTGGGTTCTGTGGAGGCAAGATCTTCCTTTCCTGACCAGATTAAGGGAAGAACGTCCGATGATGAAAAATGCGCAGAATCCCAGATAAGAATTGC
GAGGAGAGGGCTAAGAAGCCCAATTTGTGAGGAAGTGTTTTGAGGATCAGGGGAAGTTAGTTGTCCCCGCGTCCAGATTTGATCAAACTTTCTGACAAGG
CTC
>LE_HBa0208N16_SP6_371259 (trimmed for quality and cloning vector)
AGTTTTTGCTGATGTAGTGTCCTTCTTGGGAAACGTGGTTTCTACGGATGGAGTGATGGTGGATCCTTCTAAGATTGAGACAGTGAAGAATTGGGTAAGA
CCTACTAATGTGTCAGAAATAAGGAGCTTTGTTGGGTTAGCTAGCTACTACCGCCGATTCGTCAAGGGATTCTCTTCTATCGCTTCCCAATTGACGAACT
TGACTAAGCAGAATGTCCCATTTGTATGGTCGGATAAATGTGAGGAAAGCTCTCAGAAGCTCAAGACTTTGTTGACTACCGCACCTATCCTTACCTTGCC
AGTAGAGGGTAAGAACTTCATTGTTTATTGTGATGCATCCTATTCTGGTTTGGGTGCAGTACTAATGCAAGAGAAGAGTGTGATTGCTTATGCTTCAAGA
CAATTAGAAGTGCATGAACGTAACTATCCCACTCATGATTTGGAATTGGTCGCGGTAGTGTTTGCATTAAAACAATGGAGACACTATTTATATGGGGTTA
AGTGTGAGATCTATACGGATCATCGTAGCCTTCAGTATGTCTTTACTCAGAAAGATTTGAACTTAAGACAAAGGAGATGGATGGAGTTACTAAAGGACTA
CGATATCACTATCTTGTATCATCCGGGGAAGGCGAATATTGTAGCGGATGCTTTAAGTAGGAAGGCGGGAAGCATGGGAAGTCTAGCTCACT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.976712
Expected error %
0.298641
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0208N16
Clone
Clone name
hba-208n16
LE_HBa0208N16
P208N16
Clone type
BAC
Contamination
none
Estimated length
58,622
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found