Clone Read LE_HBa0209F08_T7_371571

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0209F08_T7_371571
Primer
T7
ID from Seq. Facility
LE_HBa_209_F08-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1900 raw
Sequence
>LE_HBa0209F08_T7_371571 (raw untrimmed)
TCAATTAACAAAATACCTATATCTAACCAAACTACCACCTAACAACTTTATCCATTATCCATTATTAATCACACAACACATTACTCTACCCCCGCAGTGT
ATAATATCATCACCAATCTACCTACTTTCCAAACAATACCAACTAATATCATCACTTAAAAAAGACGACCCTCCCCTTTTTATATCTAATACTACCACAC
TATCACATACTACTAACGGAAGAGAGCTACTTCACTACTAATATTACTGCTATACTCCATTACACTTACTACTACACTACCTCATATAATAATACACCAT
AATCCATTGACACAACACACACACTACAAACATATTATTACATAACTTTCAACTCTCTATACCTACACATATTTAATCTATCCCTACCAACTATCTAACT
TCATATATAAATCAAATTAATATTCCACCATCAATTACTCCCTCATTACATTACACACATCTATAACTAACGACATATCACAAATACTAGATAATCCCAT
AAAACTTCAATAGATATAAATAATTTGGATCACTCTAATACATATAACTTTAACCCCCTAACTCCTCTAACTTATCACCCATCGCAAATCAACCATAACA
ACTCTCATAATACATACATACAAAAAACACACTGTCAATTATCTCACTCTAAACCACAGTATCACCTTCTACTCACTACACACTCCAACCATCTAATCGC
AAACTATATCATATCAAGAAACTACATGCATATATCTTACTCATCCAACACAGCATATACACACCCACCCACAAACATCATCACATAAAACTACTGACAT
ACCCTCATAAATATAACTAATCACTATGAACAATACACACACACATTCATTACACTCCTCATCAAACCACTACACATAATATTCATACAATCACAATCGT
ATCACCAAATTATCAACTACACATATACATACTATCTTAGCATACTACAACTCTACACCATCATAACATCCAATAACACAATCAACCACAATACACCTTA
ACCTGACACTAAACTACTCTCACACTACTAACGACACAATTAAACTCAAATACAAGCTCATACCACACTTACTAGACTTTCATACAACACTATTGACATA
ATCACATTAATACTATCACAAACTCTATCAACCATTACATACAAAGATAGCTAAAATACTTATCATATCCAACCTTACAATCTCTTCCAAATAAACAACT
CAAACATATTCTCACACATCCTACCACGTCATCACAACTAAAACATAATAAAATCATCACACCATTCAATACTACGTAATAATAACATCTACATCGACAT
CTCGAATTCTAAACTTTCTAAACACACACTCTTGAGCCAACATTAATCACTTAATTAACAATTAACTCTCACATCCAAACACACAATATCTCATACCTAA
CCTCTAGCACCCAAACTCACGAAACCAACACTTCACTAAACATACACACGCAACATATTCACCCGATACAACCTCCACATACTCTCCAATCATACCATTC
ACAACCTATATCTTTCNACACTACATCCAAACAACTTGAGACACAACAT
CACAAAANAGAAGATACCTCTCCTTCTATAATCACACTCATTTAATTAATG
ACCACCGATACAACATACATACACTAGTGAGAACAACACACACACTAATCCACATATCACGTACAACCAGATCAGACCACTTCATTCTATTCACCCGATA
ACTATTATCACACTACGCCAACTCAACAACAATCCCTATTATCTCCAATACACACTCCAAACACACCTGCTACATCTTTCGACTCAGAAATATATACCAT
CAATCACTCAATCTACACTCTTACCCACTCTACACACAAACACTACCAAATCATTCCCATCATCACCCCACGTACACATCTTCATACAAACATACACCAG

>LE_HBa0209F08_T7_371571 (trimmed for quality and cloning vector)
CA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.3877
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0209F08
Clone
Clone name
hba-209f8
LE_HBa0209F08
C06HBa0209F08
P209F08
Clone type
BAC
Contamination
none
Estimated length
109,890
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found