Clone Read LE_HBa0210F16_T7_372219

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0210F16_T7_372219
Primer
T7
ID from Seq. Facility
LE_HBa_210_F16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1466 raw
Sequence
>LE_HBa0210F16_T7_372219 (raw untrimmed)
CATGACGGTCGAGCGCATTATGTCATCTTCTATCANACTACATATNCGTATCTACGCTACTTCTGTGGGTCGCCAAGAGGGTNCNCNGATNCACTATATC
GACATTCGCTTGAAGCTGTACGCANACACGTNTACTATGAAGTCGACGACGNGCGTACTCTNACACAAGACGCACTNTCACCCTACCACNTATCGACGGT
ACTTGTAGCNGTACGTGTGCTACTAACAGCAGTATCTAGACGGANTATCGTGTACTGTGACTATACGCTCNGACCACAATCTGGACGATGATTANGCTCT
NCATCGCTCGTACAGCATGTCTATGNGNTAGCGACGATAGCACGTGACAGGATCGAGCGNTACGCAGATGCTAACTTACGAGTGCTGGCACAGTCGCTAT
AGAGTCTAGCGATCGCGAGCAACATGCGTCGTAGCGTGATACACGATTGTAGCGCAACGCTGATACCGCTGACGCCGTCACTAGCACCTGATAGGGCATT
GTGCGCCCATACGAGACTCGGTGAATGTATCGCGACTTACAGGGTGTATGCTGATACGACGAGTGATAGTGNGAGTAAACAGTATGATGCGCAAGGTGGA
ATAGATACTCNATCGCTACGCTGCGAGATCGATGNCNGAAANAGTCGTATACATACTGCTGTCTAGTCAGTTGGATATGGCGTGCAGTGCGACACGATCT
CAACGTCATGTGACTCATTATAAGTAGCGCNAGACATTGAAGTCGGTCTCTCCTCTAGTGGAGTGCAGAGAGTATGTACTCGCAGCTATAGACATGTCAC
GCAAGTACACTACGAAGCTAGACGCGCACANAGAGCTTGCACCTCCTCCTACGGTATCAGTAGTNGNTANTCGATGTGCGACCATATCTACCTACCTTCA
TTGCGCACTAGTAGGACGCGTAGCGTGAGATGAATATCTGCAATGACAATACTTACCGTTAATACTCACCTTGGCATAACCGCCGTAAAGCCGATGTATA
TGCGATATAATCACCGAGCGACAGCGGGAGACGTAATCTGAGTCTATACGATCCAGCAGAGCNAGCGNGACTCACGAATGGCTANGTCCGACNCAGAATT
TCAGAGACTGTGCGAGCTCCTAGGATACATAAGACGCCTATATGATCGACGGAGAGTCATAATGATACGACGGTAGACCAGATACGCTACGACNTCAGGT
ACGCAGACTCTAGACGAGTGCACGCTCGTCTCCCATATGGGCATGTGCTATCAGTCCACGTACCGACAACTATGACAGTACATCGCTAACATGCAGTTAA
GTATTCGATACGTCTATAGTAATAGACNAACAGTGTGGGTAGGCAACGATAGATCTGATTCAAGATTAGCAGAGCTACACANTCGCAGAGCGAAGCTCTA
ACGCGAGCTACAACAGTGCCGACTACTACACACTAGTACAGCGCTCCCGCTACAATCACAACAGAG
>LE_HBa0210F16_T7_372219 (trimmed for quality and cloning vector)
C

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0210F16
Clone
Clone name
hba-210f16
LE_HBa0210F16
P210F16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found