Clone Read LE_HBa0212M16_SP6_373842

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0212M16_SP6_373842
Primer
SP6
ID from Seq. Facility
LE_HBa_212_M16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
843 trimmed for vector and quality, 914 raw
Sequence
>LE_HBa0212M16_SP6_373842 (raw untrimmed)
GGGGCCAGCTACTANTAATTCTCTGGCTCTTCACAATTCACGCATAAATAAATGAACTTTTTTAACTCAACATTTAGCCTATACATCCATATATGCAAAA
TAAAAGTGAACCTTTATGTTCAACATCACAGTGCTAGAGATAAATAGTCTATTCCCACCCACTCTCTCTCTCTCTCTCTCTCTCTCTGAGTTTCTTGTGA
AAAATCAAGTGTTATTTTCTGACTCCACCTATATACTGAAGAACCAGCAACTATGGAATAGGTAAATGCAGAAATAAAATATTTAACACAAGATTTTACT
GGAAAAACCCCTTCCCCAAGAACAAAAAACCGCGACCTGCCTTGTAGTATTTCCCTCCCAAACTACCACTAAATTTGAGTCACTGATTTATGTTACAACT
CTATAACCACAGGGTTTACAACTATAGTACCTTTTCCCCTTTACGATTTGTCCTAATTGTATCTCACTTCTTTCAAGACTCTACTTAGTGAAGGAAGCCC
AGACAGTTCCAAAGTCCAAACAACAGCTATGACAAATAGCTAGGAATGTAAAGGTTACAAGTTATGCTCAACGAAACAAACTAGACAACAAGAACTGTAA
TAATAAATCTGGATAGGAAGAGGTTCTTTTGTCGTTGCCAGGTGACTCACCTCAAACCAAAAAAAACTTTGTGATAAGACCTTGTTCTTATTCTCTTTGT
ATGATCTCTTTTCTCACTGAGTGGATTCCTCAACAACATCAACATGACGCTTTATATAGTAGTAGATGGTCATTTTTTGTTCTCCCAACTCAACATGGAT
TAGTTCAAGAATTTCAGAACCTAATCCAAGTTTCACCTTATTTCCATCGTTCTTTAACGTCGACCTTCTCTTNATATAAAGCTTTCTTCATGTGCAAATA
TATTGCTTCTTGTN
>LE_HBa0212M16_SP6_373842 (trimmed for quality and cloning vector)
ATTCTCTGGCTCTTCACAATTCACGCATAAATAAATGAACTTTTTTAACTCAACATTTAGCCTATACATCCATATATGCAAAATAAAAGTGAACCTTTAT
GTTCAACATCACAGTGCTAGAGATAAATAGTCTATTCCCACCCACTCTCTCTCTCTCTCTCTCTCTCTCTGAGTTTCTTGTGAAAAATCAAGTGTTATTT
TCTGACTCCACCTATATACTGAAGAACCAGCAACTATGGAATAGGTAAATGCAGAAATAAAATATTTAACACAAGATTTTACTGGAAAAACCCCTTCCCC
AAGAACAAAAAACCGCGACCTGCCTTGTAGTATTTCCCTCCCAAACTACCACTAAATTTGAGTCACTGATTTATGTTACAACTCTATAACCACAGGGTTT
ACAACTATAGTACCTTTTCCCCTTTACGATTTGTCCTAATTGTATCTCACTTCTTTCAAGACTCTACTTAGTGAAGGAAGCCCAGACAGTTCCAAAGTCC
AAACAACAGCTATGACAAATAGCTAGGAATGTAAAGGTTACAAGTTATGCTCAACGAAACAAACTAGACAACAAGAACTGTAATAATAAATCTGGATAGG
AAGAGGTTCTTTTGTCGTTGCCAGGTGACTCACCTCAAACCAAAAAAAACTTTGTGATAAGACCTTGTTCTTATTCTCTTTGTATGATCTCTTTTCTCAC
TGAGTGGATTCCTCAACAACATCAACATGACGCTTTATATAGTAGTAGATGGTCATTTTTTGTTCTCCCAACTCAACATGGATTAGTTCAAGAATTTCAG
AACCTAATCCAAGTTTCACCTTATTTCCATCGTTCTTTAACGT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.950433
Expected error %
0.372963
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0212M16
Clone
Clone name
hba-212m16
LE_HBa0212M16
P212M16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found