Clone Read LE_HBa0212M22_SP6_373854

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0212M22_SP6_373854
Primer
SP6
ID from Seq. Facility
LE_HBa_212_M22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
788 trimmed for vector and quality, 890 raw
Sequence
>LE_HBa0212M22_SP6_373854 (raw untrimmed)
GCCNNNCCAGTAGGAGATATGTTTATCTAGATTAGTAGACACTCGTAGGACTAAAGTGAAGTCATTCAACATTAAGGATGCTAAACAAAGGTTGATTCGT
TGAATATTTCCTCTCCAAATATTTGACCTTGAGATCAAAGAGAAAAAAAGGTACGTCAAATCATATAGCTCACTTATCAAAGTTGGATGATTTCTCACAT
GTCAATGAGGGTGACCAAATACGGCAAAGAGTTTCCGGTTGAGCAATTGATGGCTTTGTATATCTCTCAAGTTCCATGGTATGCGGACATTGTGAACTAA
ATAGTGAGTGGAGATTATCCGCCAGGTGAAACCACCCTACAAAAGAAAAAGTTAAATCATGATTCCAAGTTCTACATCTGGGATGTACCATTCTTTTTCA
AACAAGATGTTGATCGAGTAGTGAGAAGTGGCATCACGGAAGCTGAGGTTCACAAAGTTCTTGAGACTTGTCATGCAAGTCCATATGGAGGTGACCATGG
AGGAGAGTGCATTTCTCATAAGGTTATACAATCTGGTTTCTTTTGGCACTCATTGTTTAAAGATTCTATTGCTTTTGTGAAGGGCTATGATAGGTGCCAA
AGATTGGGTATCATCTCAAGAAGACATGAGATGCCCCTCAAAAATATTTTGGAGGTGGAAATTTTAGATGTGTGGGCTATGGACTTTATGGGTCCATTCC
CACAATCAGATGTAAACATTTATATACTTGTAGCGGTAGATTATGTGAGAAAATGGGTCAAGGCAGTCGCTCTCCCTTCTAATGACTCAGGCGTGGTCAT
TAAGATCATCAAGAAGCACATCTTCACTCATTTCGGCACTCCCAGAGAAAATATAAGTGATGGAGTTAAGAATCCCATTAACATCTTGTN
>LE_HBa0212M22_SP6_373854 (trimmed for quality and cloning vector)
GTAGACACTCGTAGGACTAAAGTGAAGTCATTCAACATTAAGGATGCTAAACAAAGGTTGATTCGTTGAATATTTCCTCTCCAAATATTTGACCTTGAGA
TCAAAGAGAAAAAAAGGTACGTCAAATCATATAGCTCACTTATCAAAGTTGGATGATTTCTCACATGTCAATGAGGGTGACCAAATACGGCAAAGAGTTT
CCGGTTGAGCAATTGATGGCTTTGTATATCTCTCAAGTTCCATGGTATGCGGACATTGTGAACTAAATAGTGAGTGGAGATTATCCGCCAGGTGAAACCA
CCCTACAAAAGAAAAAGTTAAATCATGATTCCAAGTTCTACATCTGGGATGTACCATTCTTTTTCAAACAAGATGTTGATCGAGTAGTGAGAAGTGGCAT
CACGGAAGCTGAGGTTCACAAAGTTCTTGAGACTTGTCATGCAAGTCCATATGGAGGTGACCATGGAGGAGAGTGCATTTCTCATAAGGTTATACAATCT
GGTTTCTTTTGGCACTCATTGTTTAAAGATTCTATTGCTTTTGTGAAGGGCTATGATAGGTGCCAAAGATTGGGTATCATCTCAAGAAGACATGAGATGC
CCCTCAAAAATATTTTGGAGGTGGAAATTTTAGATGTGTGGGCTATGGACTTTATGGGTCCATTCCCACAATCAGATGTAAACATTTATATACTTGTAGC
GGTAGATTATGTGAGAAAATGGGTCAAGGCAGTCGCTCTCCCTTCTAATGACTCAGGCGTGGTCATTAAGATCATCAAGAAGCACATC

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964475
Expected error %
0.335686
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0212M22
Clone
Clone name
hba-212m22
LE_HBa0212M22
P212M22
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found