Clone Read LE_HBa0113D21_SP6_37432

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0113D21_SP6_37432
Primer
SP6
ID from Seq. Facility
LE_HBa_113_D21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
1 trimmed for vector and quality, 1090 raw
Sequence
>LE_HBa0113D21_SP6_37432 (raw untrimmed)
AGACTACTGAGATAACCCGGGTTTCAAACGAGAGCGACTAAGGCGGTATGCGGAAGGCAGCACTTTATACATAGTTTGAGGTCTTACGCCTATACGCCTG
ATCCGCCCCCACTTACGCCGCACCTCTTCCAGTGGATCCTCGAGGCAACCTCGCTGAGGGGCACCTAATACCGACGCCTCTGAAACCGGGATATGCCCCT
CGCTCTCATCTCTAGTCTTAGATCCGCGTTCAATTAACGGAGATTTTCACGGAGTTGGGCGCTCCGCCGGCGCGTCGGTCCGCGGGGGCGATCGCGGACC
ACTCCAGCAGTGCCCTCGCGTCCACCGATCGACAGGCTCCTATCCTGTCACCTATTAATTCCTATTATCATGTACGTATCCATCGACCTCTCAGACGCTC
TAATGCAGTCACTACGCCTCCGCTACCAGAGACATGTAGACAACTGAGTGTTAGTAATCTCTAATAAATGAGTTGTTGAAGTAGTACGACACGCACATCT
ATGTGATGAGGTAAGCAAAGGCGAAAGTGAGTGTGAAGAGTAGACGTAGATAAACGAGCCAGAGTAGACGTCGCGAACGCACGTATGGTACTGATATATA
CTTGAGTCTGTGGCGAGACGTGGGGTGCTCGAATGTATCCCTAGACTGTTAATATCTGTCGTCATTTTGGAACCTAGTATCTCAGATCTTCATTCATGTT
ACAATACACCACACCCTAATGATGCGCTCAATTAGCAGTATACACTACACTTAGCCTCCTGACTGTGAGCTTGGAAAAAAGAATAAAGAAGCTTATCGTC
AGCGCCACGCGTGACTGCTCCATCTCTAATAAGTATCAACAAATTTTGTTCAGTCTTCTTTTTTCTTGATCTTTTATTTGTCTCAATATACCTCCTCGTC
CTTATTGCCCCCTCCCCACTTTTGGATGACTATCCCACTTACTCTCGCGCAAACTCACACTTGAGTACACGATGTTACTAAAGACCACGCTAGAGTGTTC
AGCTTATCATTTGACTAGAAGCTATATATAATACACCACCCCCCGCCCCTATTTTAAGATGCTTACACAATATGTGCGTAAATATCGAAT
>LE_HBa0113D21_SP6_37432 (trimmed for quality and cloning vector)
A

This is probably not a useful sequence.

Problems:
  • Low complexity
  • High predicted error rate
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
100
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0113D21
Clone
Clone name
hba-113d21
LE_HBa0113D21
P113D21
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found