Clone Read LE_HBa0214B18_SP6_374854

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0214B18_SP6_374854
Primer
SP6
ID from Seq. Facility
LE_HBa_214_B18-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
729 trimmed for vector and quality, 838 raw
Sequence
>LE_HBa0214B18_SP6_374854 (raw untrimmed)
NNNNCCGCTGNAACNCTTACTCGAAGGTTGCCAGTTTGAGCAACATTGATTGGGTAGAGAGGTTCTCCCCTTTAGGGTGCAGGNCTGCAGGAGAAGATAT
GGCAATGGGCATTTCCTGGTCTGATGGGAGAAATTGCAGCTCTTCCAACAGCTGTGTGTAAGTACTTAAACTTTTACTCTTACAAGTTACAGCTAACATA
TATCATGATTGCAGTGGTGCTTTCCAATATTTCTCTATGCACAACTTAGTGACAAATAGTGATGCTCCCATTTTCTTGTACTGTTTTTGTGTTTGCACTG
GTTTAAAGGTTTCCTTTACTAGTTACTTTGCGGTCCTTTTTTTTTTTTACCAAGTATTCATCTTGCATAATCTTAATATATTTGAACTTCAAGGTTCCTG
CTGATTCCACTGGTTTTGTTCAGTAAAAAAGGTTCAGATAGGCTGATATGTTTTGTCACTAATTAGCATAAAGTAAATACTAAAAAGTTAGCCATCTCCT
TGATGATTGCACAACAACAACAACATACCCAGTGTAATCCCACAAATGGGGTCTGGGGAGGGTCCTGTGTCTCGCGAAAACAACTCTGAATCTGTTTTTA
TCACTATTATAATGGTTACTGCCCTTATTTGGATTATTAATTGCCTAATTTCTATCAAGGTCTTGAGGACCGTTTAGACAGAGCTGTTACCATTAGTAGC
TAGAACGTTATCTTCTTCGTGCACAAANGAGGACCATGACTGGTAAAAATATTGCCCTCTTTCTAGTCTTGAAGACACTGTTATCCAAATTATTAGCAAG
TTTCTTGACACTTGGCATCTCCATGTAGAAACCTGAAA
>LE_HBa0214B18_SP6_374854 (trimmed for quality and cloning vector)
AGTTTGAGCAACATTGATTGGGTAGAGAGGTTCTCCCCTTTAGGGTGCAGGNCTGCAGGAGAAGATATGGCAATGGGCATTTCCTGGTCTGATGGGAGAA
ATTGCAGCTCTTCCAACAGCTGTGTGTAAGTACTTAAACTTTTACTCTTACAAGTTACAGCTAACATATATCATGATTGCAGTGGTGCTTTCCAATATTT
CTCTATGCACAACTTAGTGACAAATAGTGATGCTCCCATTTTCTTGTACTGTTTTTGTGTTTGCACTGGTTTAAAGGTTTCCTTTACTAGTTACTTTGCG
GTCCTTTTTTTTTTTTACCAAGTATTCATCTTGCATAATCTTAATATATTTGAACTTCAAGGTTCCTGCTGATTCCACTGGTTTTGTTCAGTAAAAAAGG
TTCAGATAGGCTGATATGTTTTGTCACTAATTAGCATAAAGTAAATACTAAAAAGTTAGCCATCTCCTTGATGATTGCACAACAACAACAACATACCCAG
TGTAATCCCACAAATGGGGTCTGGGGAGGGTCCTGTGTCTCGCGAAAACAACTCTGAATCTGTTTTTATCACTATTATAATGGTTACTGCCCTTATTTGG
ATTATTAATTGCCTAATTTCTATCAAGGTCTTGAGGACCGTTTAGACAGAGCTGTTACCATTAGTAGCTAGAACGTTATCTTCTTCGTGCACAAANGAGG
ACCATGACTGGTAAAAATATTGCCCTCTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.971874
Expected error %
1.70678
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0214B18
Clone
Clone name
hba-214b18
LE_HBa0214B18
P214B18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found