Clone Read LE_HBa0214B18_T7_374855

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0214B18_T7_374855
Primer
T7
ID from Seq. Facility
LE_HBa_214_B18-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
25 trimmed for vector and quality, 1132 raw
Sequence
>LE_HBa0214B18_T7_374855 (raw untrimmed)
CCGGGACTCTAGAGTCGACCTGCAGGCATGCAAGCCTTTGATTCTTGAATNTAGGTGTGTCCTGTGGGGTGCGGTGGGGAGGTGAGAGGTGACTCGATTA
GTTAACCCCCTTTTAAAACCACTAATTGATAGAAATTTTTCACACTTTTCAAACTAACATTACTCATAATCACCTAAAATACAATTAACACCCTACAACC
ACCTCACCATTCACAACCATTTTACAACTCACTACAACCCAAATCATCACAAATACACTTCCTTATCAAAATCACTCCCTCTTACTTATAACATCTCCTC
CTTCATTTACTCACCTACACACCACCCACTTTATCTTATAAATACAATAACTATCACCAATTCCCCATTTACTCACTACTCTATACCCTTTTTCTAAATT
CCATCACATTTCACACTTAATTATAACACCTCTCCCCCATCTAAATATATAACTCTTTCAAACTTCCTCAACCATCCTACCTAACTTCCCCACTACTCCA
TCATTACCCCTTAAATTTACCCACCTCTCTTAACATCTCTAATCTTCCTACTTCCTATTCCTTTATACATAATTCCTCCCCTTCCAACACAAAATCCCTC
TATATTTCCCAATATATAATATCCCACAACCACTCCCCTACTTACTCCAACTTTAACCACCTTCTACACTTCTTTTTACCACTTTTACCTACTCATTCAT
CTAACACAAAATACACAACATTCTCTTTTTTATTTTCTCATAATACCCTACCCTACTAACCCTTATATCTACCACTTAATTCTAAATTTAATCTCTCCTC
TCACTATACTCCTTTCACATCACCTATAACTCTCTTCTACTAACACCATCTCCCCTATCACTACACACATCTACTTCTCATTACCTACTATCCACTTTCT
CTCCTCTTAACAAATATCTTCTCTCTTTCTCATCTTCTAAATTCATACCATATCACTTCTTTAATTCATTTCTCCCCCATAAATCTCCCCTTTCTTCTCA
CTACCTCAACTCATAACTACACACCTTTTCCTCTTACTACTCCTATTCTAACATCCTCTTCCACCTCTCTATCTAACTTATTTCCAACTCTTATATACTC
TTTTACCTACTACATTACATACTTAACTTTCA
>LE_HBa0214B18_T7_374855 (trimmed for quality and cloning vector)
TGCAGGCATGCAAGCCTTTGATTCT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.63819
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0214B18
Clone
Clone name
hba-214b18
LE_HBa0214B18
P214B18
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found