Clone Read LE_HBa0214J17_SP6_375236

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0214J17_SP6_375236
Primer
SP6
ID from Seq. Facility
LE_HBa_214_J17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
679 trimmed for vector and quality, 818 raw
Sequence
>LE_HBa0214J17_SP6_375236 (raw untrimmed)
CCTTAAGACATTGTGGTGTATTGTGATGCATCTAGAGTTGGCTTGAGTTGTGTTCTTATGCAAAAATGACAAATTTATAGCTTATGCCTCCCGCAGTTGA
AGGCTCATGAGATGAACTACCCAACCCACAACTTAGAGTTGGCTGCTGGAGTTTTTGCTTTGAAGATATGAAATCACTATTTGTATGGTGTTCATGTTGA
TATATTCACTAATCACAAGAGCCTACAATATTTGTTCACCCAGAGAGCTTAATCTCAGACAGAGTAGGTGGTTAGAGTTACTCAAGGATTATGACATGAG
TAATCTTTACCATCCAGGTAAGACTAATGTGGTTGTTGATACTTTAAGTAGGTTATCTATGGGTAGTAGCACCTATGTTTAGGAAGAAAAGAAAGAGTTA
GCCAAGGATGTGCACAAACTTGCACGCCTGATGGTCATACGTATGAATTCCACATAAGGAGGAATAGTGGTGGCGAACAGGGCTGAACTATCATTAGTGT
CAAAGGTAAAAGAGAAGCAAGACCAAGATTCCATTTTGCTTGAGTTGAACGAAAATTTTCATAAGCAAAGAATATTAGCTTTTGAACACGGGGGGAAGGT
GTATTGAGGTACCAAGGTAGATTGTGTGTACCAATACTGGATGAACTCCAACAGAGGATCATGGAAGAAGCTCATAGCTCCGGATATTCCANTCCTCCAT
GTTCTACCAAGATGTATCGCAATTTGAGAGAAGTATATTGGTGGAATACCATGAAGAAAGGCATCCCCGAGTTTGCAGCTCAGTGTCCCAATTTGTCAAC
AGTGAAAATTTGAATACA
>LE_HBa0214J17_SP6_375236 (trimmed for quality and cloning vector)
TTGTGGTGTATTGTGATGCATCTAGAGTTGGCTTGAGTTGTGTTCTTATGCAAAAATGACAAATTTATAGCTTATGCCTCCCGCAGTTGAAGGCTCATGA
GATGAACTACCCAACCCACAACTTAGAGTTGGCTGCTGGAGTTTTTGCTTTGAAGATATGAAATCACTATTTGTATGGTGTTCATGTTGATATATTCACT
AATCACAAGAGCCTACAATATTTGTTCACCCAGAGAGCTTAATCTCAGACAGAGTAGGTGGTTAGAGTTACTCAAGGATTATGACATGAGTAATCTTTAC
CATCCAGGTAAGACTAATGTGGTTGTTGATACTTTAAGTAGGTTATCTATGGGTAGTAGCACCTATGTTTAGGAAGAAAAGAAAGAGTTAGCCAAGGATG
TGCACAAACTTGCACGCCTGATGGTCATACGTATGAATTCCACATAAGGAGGAATAGTGGTGGCGAACAGGGCTGAACTATCATTAGTGTCAAAGGTAAA
AGAGAAGCAAGACCAAGATTCCATTTTGCTTGAGTTGAACGAAAATTTTCATAAGCAAAGAATATTAGCTTTTGAACACGGGGGGAAGGTGTATTGAGGT
ACCAAGGTAGATTGTGTGTACCAATACTGGATGAACTCCAACAGAGGATCATGGAAGAAGCTCATAGCTCCGGATATTC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.966526
Expected error %
0.507713
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0214J17
Clone
Clone name
hba-214j17
LE_HBa0214J17
P214J17
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found