Clone Read LE_HBa0214N11_T7_375417

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0214N11_T7_375417
Primer
T7
ID from Seq. Facility
LE_HBa_214_N11-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
9 trimmed for vector and quality, 1558 raw
Sequence
>LE_HBa0214N11_T7_375417 (raw untrimmed)
NCCATTCTTGAGTAAAAGAAAGAGGGGNNNNNNNNNNNNNNNTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNGNGGGNGNNNNCNTTCTANATAAGAGAG
AGAGGGGGGGGNNNNNNGNNGGGNNNNNTTTGGGGGGGAGGGGGANNNANNNAAANAAANAAANAAAAAAAAAAAAAAAGGGAAAAANAAAANANAAAAA
AAAAAAAANANAAAAANANAAAAAAAAAAAAAAAAAACAAAAAAAAAAAGAAANNNNAAAAAGAAAAGAGGAAGAGAAAGAAAAGGAAAAAAAGAAAAAA
AGGGGGGGGGGGGGGGGGGGGGGGGGAAGAGAAGGAAAAAAAAAAACAAGAAGAAAGAGAAAAAAAAAGAGAGGGGGGGGGGGGGANAANAAGAGAAAGG
AAGAGAGGAAGAAAAGAGAAGGAAGAGAGGGAGAGAGGGGAAGGAAAGAAAGAAAGAAGGAAGGAGCCAAGGAGAGAGAAAGAGAGAAAAGGGGGGAGCA
GAAAGAGGAGAGGAGAGAAAAAAGAGAGGAAAGGAAAAAGAAAGGAGGGAGGAAAGAGGAGAAAGAGGAAAGAGAAGAGAAGGAAGAGGAGGAAAAAGGA
GAAAGGAGAGGGAGAAGGGGGAGAAAGAGAGAGAAAAGAAGGAGAAAAGAAGAAAGAAGAGGAACAGACCAAGAGAACACAGGCCACGACAGACACGGAC
CCCGGCCACAAAAGGAGAAAACACACGACAGCCGAAACAAGGG
GGGGGGGGGGGGGGGACAGAAAAAAGAACGCAAGAACACAGCAGGCGCAGGAAAGAA
GAGGAGCCAGCGAGAGAAACAAGACGGAAAGACAAGAGAGCCACGAAGAAAGACGACACACGCGAAAGGGCCAAACAAGGAGACGGAACAGCGAGAAGCG
AAGCGACAGCGAACCACAGAAGCACACAGAGCAGAAAAGAGGACAGCAAGAACGCAGGACGGAGCAGAGCGAAGAGGACAAGACGACGACAAGACCAAAG
GCACAAAAACAAAAAGACGAAAAGAACACGAGGAAACAGGGACGAAAAAGGAAGGAAACAACAAGCACCGGGAGGCAACGACGCGGACACACCGACGGAC
GAGGCGGGGGACAAAAACCGCACCCCACGACCACCGAACGCAACAGAAGCAACGACGGAAAACACAACAGCTGAGACCACCGCACACCACAAACAAGACA
ACAGCACGCAGGCGAGCAGACAAGCCCGCGACGAAGGGGCAAAGGACAAGAGCACACGCGAGAAAAGGAGAAGGAAGACCGGCACAGAAACACAGGAACG
AGGGAAGGAGACAAAAGGGAGACAGCACAAAAGGAGAAAGCGCGAGACACAAAGGGGACGACGCGACAGACACAGACGAGAAAGAACGAAAGAAGAGAAA
CAAGAGACCAACCCAACGAAGAAGCACACACGAGANGAACGCGGAACGACACGCACACCCGCAAGAAGCGAACGCACAAGAACGGAACACAAGGAAAGAA
GAAAAGGCGGCCAGACGAAAGCCGGCAAGGAGAAAGCGGCTACGGCAAGAAGAAACCC
>LE_HBa0214N11_T7_375417 (trimmed for quality and cloning vector)
GGGGGGGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.506235
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0214N11
Clone
Clone name
hba-214n11
LE_HBa0214N11
P214N11
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found