Clone Read LE_HBa0224I22_SP6_377118

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0224I22_SP6_377118
Primer
SP6
ID from Seq. Facility
LE_HBa_224_I22-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
737 trimmed for vector and quality, 863 raw
Sequence
>LE_HBa0224I22_SP6_377118 (raw untrimmed)
NCGATTTTTCGGGAGATTTCTCTACTTTTCGACATCTCGGCATAAGGACACTCCCCATAAGAACCTCTAGCGGTAGTATCAAGTACCGCTTTTATCATCT
TGTCCCCTATAGACGTATTCCTTTAGTGACTCATCATCTATGCATTGATTAGGGACACTTCTCAAAAATGAAGTGAATCTATCCCAAGAACTACTAACTG
ACTCTCCTGGTAGTGCCACAAAGTTGTTCAGTCTGTCTTTGTGGTTTAGTTTCTTGGAGACCGGGTAGTAGCGTGCTAAGAAAACGTTCCTTAGTTGGTT
CCAAGTGAAAATTGAGTTGTAAGGGAGCTCAGTGAACCAAATAGCAGCCTCTCCCGTCATTGAGAGAGGAAACACTCTTAGCCCTATTACATCCAAGTCC
AAGTCAGGCCTCCCTACACAAATTTTACACACTGCCCTTACCTTAGCTATATGGGCATGTGGATCCTCAGAAGGTACCCTGAAAACAATCCTCTGGCAGT
TAGCATTTGCATCAGGCTACTAGTTACCACAAAGGCGTGGACTGGTGGTAGAGGGGGCAAGACAAGCGGCCCATCGGAGTGTGCTATATTTTCATAGCCT
CTGTAGTATTCTTGAGGACATGGAGAGGGGTTCTGTCCCCTCTATTGGTTATCACCCGGAGCATCATGTAACAACAGACCATGAACATCAACCGTAGCTG
GGATGTTCTGGTTTGGATCATCATCATTAATACCCAAGTTTCGATTCATGTTGTGTAGTGTACCCTCTAATTTGTGATCGTAGGGAAACAATGATTCTCT
TCCTCTTCGGGAATTTGGGATACAAAAAAGATGGTTTCGGCAAAAAATCAAAAACCAACAAAA
>LE_HBa0224I22_SP6_377118 (trimmed for quality and cloning vector)
ACTTTTCGACATCTCGGCATAAGGACACTCCCCATAAGAACCTCTAGCGGTAGTATCAAGTACCGCTTTTATCATCTTGTCCCCTATAGACGTATTCCTT
TAGTGACTCATCATCTATGCATTGATTAGGGACACTTCTCAAAAATGAAGTGAATCTATCCCAAGAACTACTAACTGACTCTCCTGGTAGTGCCACAAAG
TTGTTCAGTCTGTCTTTGTGGTTTAGTTTCTTGGAGACCGGGTAGTAGCGTGCTAAGAAAACGTTCCTTAGTTGGTTCCAAGTGAAAATTGAGTTGTAAG
GGAGCTCAGTGAACCAAATAGCAGCCTCTCCCGTCATTGAGAGAGGAAACACTCTTAGCCCTATTACATCCAAGTCCAAGTCAGGCCTCCCTACACAAAT
TTTACACACTGCCCTTACCTTAGCTATATGGGCATGTGGATCCTCAGAAGGTACCCTGAAAACAATCCTCTGGCAGTTAGCATTTGCATCAGGCTACTAG
TTACCACAAAGGCGTGGACTGGTGGTAGAGGGGGCAAGACAAGCGGCCCATCGGAGTGTGCTATATTTTCATAGCCTCTGTAGTATTCTTGAGGACATGG
AGAGGGGTTCTGTCCCCTCTATTGGTTATCACCCGGAGCATCATGTAACAACAGACCATGAACATCAACCGTAGCTGGGATGTTCTGGTTTGGATCATCA
TCATTAATACCCAAGTTTCGATTCATGTTGTGTAGTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.98226
Expected error %
0.658556
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0224I22
Clone
Clone name
hba-224i22
LE_HBa0224I22
P224I22
Clone type
BAC
Contamination
none
Estimated length
83,268
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found