Clone Read LE_HBa0244A21_SP6_378652

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0244A21_SP6_378652
Primer
SP6
ID from Seq. Facility
LE_HBa_244_A21-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
3 trimmed for vector and quality, 1396 raw
Sequence
>LE_HBa0244A21_SP6_378652 (raw untrimmed)
TTGCTTTTATGATTATTAGTTTTTGTTACTGTAAAAACATTCAGTGCTGCAACCCCTGTTTATGAGGGTATTTTAGCATGCTAGTTGTAAAATTGCCACC
AAGTCTCTCCCTCC
TTTACGGTCACAAGCAACCCAAATTTCCAATTTATTTAACCGTATTACCCGATATATTATGCACCAAGGCAATTCATTGAGGGAAT
GTCCCCTAAAACTTGTCTAAAAATTTTGGCCTCTGAAAAAACTTTTTCCCAAAAAATAAAAATAAAACTTCCTTTGTCCACCACCTTCATGTGAATTGGG
ACCACCTCCACCTAAAAAAGGAACACCCCACCACTGTGCCCTTTTCCCCGGGGGTTCTCTACTGCCTTTGTTGCCTAATCTTGGTCCATGGAACTTCCTA
TCTTACCTAAATAAAACAAATATTTTTTTTGCGAAAACCTACTCTTTTTAGCATGATAATAGGCCCACCCCAATTATCCAATGTTTTTATATAAAAAAAT
TCCTCCTCCTCCTTAACTTTCACATATCTCTCCGGCACACCAATATACTTTAGCACAACTCTAGAAAATGTTTTAATCCTCCACCTTTATATCCACCACT
CTATTTACTTCTTATCTTCTTATTATCTCTTACACTTCACTTTACCTTCACATTTCTTTTCTTTCTCTTATATCATGCCCCCTATATACATTTAATCTTC
CTCTTCTTCTATTTCTTCTCTTATATATCCATTACATAATACTTCTATCTTTGTCTCCTATTCAATATATCACTCTCTTTCACATTTCTATATCACCTCA
TCATTATTTATTGTACTAATATGTTACACTCTTATCACCTGTTCTGTCTATATATCTCATCGCCACATCATTTTCTATAGTTTCCATCTTATTCTCAATA
CTCTCTCTCACCATATAACTTCTTTCTTCTCACTCTCCCTATTAATTCTAGCTTGTCTCACTCAAGTGTTCCTATACCCACACTATTCTNACCCACAATA
ATCCTGATATCACCATATCTCTCACATTTTTCTCTTTATACGTCTGACTTATCTATCTTTACGATTATCCTATATCTACTCATTTAATGTCTATCTTATC
TTTACTACATATTCTTCCCTTTTCTATATTCCTCCCTCTCACAACCTCTNAATAATCTCTAATAAATATATCTCACACATCATCTCTACAACCACCTTCA
TTACTTCTCACCTACTCACAAATATTCAACTGATATAACCAGACTAATATTACTTTGTCTAATATGATTTTAACTGTACCTTATACCATATAACCTTCTC
ATTTCCTTTGATAGACTACCACACCATCCACGCTTATATAACAACTTTATACACCATTCCACATACTATACAATTCACTCTATCTCTATCTTTCCA
>LE_HBa0244A21_SP6_378652 (trimmed for quality and cloning vector)
TTT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.01359
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0244A21
Clone
Clone name
hba-244a21
LE_HBa0244A21
C02HBa0244A21
P244A21
Clone type
BAC
Contamination
none
Estimated length
83,249
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found