Clone Read LE_HBa0244L05_SP6_379442

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0244L05_SP6_379442
Primer
SP6
ID from Seq. Facility
LE_HBa_244_L05-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
539 trimmed for vector and quality, 870 raw
Sequence
>LE_HBa0244L05_SP6_379442 (raw untrimmed)
GAAGGAACTGCTTCAAGTATTTAAGGACATGGTAAGCTGCCTTCAAGTGTGGTTCTCTAGGAGTTTGCATAAACTGACTGAGATAATGTACACTATAAGA
TATATCTATCTTTGTAGTTGTGAGAAAATTAAGTTTTCCTACTAACTTTCTATAAAGAGTTGGATCAGTCAACAACTTGCCATCAGTGGCCTTCAATTTT
TCAGTACAATCAAATGGTGATGAAACAATCTTCTAATTCAAAAAATCAAATTCCTTCAAAAGATTCGTGATGAACTTCCTTTGTGAAATCAAAAGACATC
ATGCCTATACAGTATCTCCAACCCCAGGAAATAAGTAATTTGCCCAAATCTTTTATTTTGAACTGATCATGCAGAAAAGACATCAAGGATTCAATTTCTT
CTAGGTCAGTTCCAGTCAAGATTACATCATCAACATATACTGCAACAAAAACGAAAGAATAGTATCTTGTTCTTATATAAAACAGTGAATAGTCACTGTT
TGAGTGTGTGTATCCTCTATAACAAAGAATACTTGCCAACTTGCCATACCACTGTCTACTAGACTGTTTCAAGCCATACCATGATTTTTTCAATTTACAC
ACCATGGTTAAACCATCTACACTAAGACCTTGTGGGAAAGGCATTAATACCCTCTAGACTAAAAACTTGTGGTAATGGCAAAAAAATTTCCTTTTTCCAA
TCACTTGAAAGAAGGGATTTTTGGACTTTAATTTGAACAATTTTCGGCCTTTTCTTCAAACCCAAAGGGATTAAGGTCCTACACAGGGTAATCTTAACCC
CGGGACAAAATTCCCAACGAACTCCTTTCCACTTTATTGGGGGATTCTTTGACTAACAACCTTGCCTTGA
>LE_HBa0244L05_SP6_379442 (trimmed for quality and cloning vector)
ACTGCTTCAAGTATTTAAGGACATGGTAAGCTGCCTTCAAGTGTGGTTCTCTAGGAGTTTGCATAAACTGACTGAGATAATGTACACTATAAGATATATC
TATCTTTGTAGTTGTGAGAAAATTAAGTTTTCCTACTAACTTTCTATAAAGAGTTGGATCAGTCAACAACTTGCCATCAGTGGCCTTCAATTTTTCAGTA
CAATCAAATGGTGATGAAACAATCTTCTAATTCAAAAAATCAAATTCCTTCAAAAGATTCGTGATGAACTTCCTTTGTGAAATCAAAAGACATCATGCCT
ATACAGTATCTCCAACCCCAGGAAATAAGTAATTTGCCCAAATCTTTTATTTTGAACTGATCATGCAGAAAAGACATCAAGGATTCAATTTCTTCTAGGT
CAGTTCCAGTCAAGATTACATCATCAACATATACTGCAACAAAAACGAAAGAATAGTATCTTGTTCTTATATAAAACAGTGAATAGTCACTGTTTGAGTG
TGTGTATCCTCTATAACAAAGAATACTTGCCAACTTGCC

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.927145
Expected error %
0.0959579
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0244L05
Clone
Clone name
hba-244l5
LE_HBa0244L05
C12HBa0244L05
P244L05
Clone type
BAC
Contamination
none
Estimated length
87,173
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found