Clone Read LE_HBa0245B16_T7_380056

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0245B16_T7_380056
Primer
T7
ID from Seq. Facility
LE_HBa_245_B16-T7
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1398 raw
Sequence
>LE_HBa0245B16_T7_380056 (raw untrimmed)
AACTAAATATAAAATCTCATGTGGGGTAAAGGACAAGACATATGTCATTAAAAGTACATGAACTTATTAAGAAATCTCCTTTATATTATGGTAAATCCTA
CTCAATATTATCGTTTGTATGAAAAATATTAATTTTTCTTTTACCTCCTCTTTACATAAATAGGAAATCCTCTTTTTTAAATATAGAACTTCTAAATATA
TTGTTGGAATCTATTAATGAGGTATTGTGATATAAATATACTGCGAAGAGGACGTTTAATTACTATCATATCTTATATAGATAATGTGACACTATAGNAA
TATAAGATAATTGTATATAAAAGAGAGATATTATTCTTAGATATAATATATAGTCCTTCCCATTGGCCAAAATATTGAACAAAATACACTTTTAATGAAA
TTTAATAGAACATTATATAAACATAAACGAAGACATGTTATTAACATCACTATAATTGTATTTAATTTTTTCCATAATATTTTTACTATACAAATAATAT
AACCTTTCAACATGTATAAGTTGTTATTATTCGACCTTTCAACAAGTATGTAATATATCTATGATTACTAATATAATAAATTTATTATACATACAATGTT
AAATATCTTATAATACATAAATAATTAAATTTATATTTAATTGATACAAAACACTAAATGTAGGTCTAAATGTTAATAATAATTATACCAAAACCTCTTT
TTTATTATTCTTAACTTCCTATAAATTTTACGAAATCTATTCTTAAAGGATTGGAACATATAATAAAATGTGAATTATTATAAATAAAACAAATATTATA
ATTATCAATCGTTATATAGTCATTAAAACAATAAAATATATTAATTTTTATATAAGNTGACAACATACAATATATATTTTATATAAATATATACATTATA
TACTACCTATGAATTATTTATTGATTATATTAATCACGACATAAATAAAATTATAAAAATAAATATATTAATTACTAAAAATTATATATAAAATAATATC
AATTTATATATTTTACTAATTATATCTGAATATATTTCGATAAAGAATAACTAAATTAAGAGAAATGGATAAACTAAATTTATTTATTCAAAATGTGTTA
ATTATCATAAAACTATATATATTATAATTCAATATTTGAAATTATAACATATAAGAAATTAATATATTATTTCTCATTTACATTAAAATATATTATATTC
CATATATATTATCTATGATAAATATATTCTCTTTTATATATAATAATAGTATTAATAAATTATAATATTTTACTAATAATAATAATTCTTAATATAGTAT
GCTAATACATCTAATCTAATGTAAAATATTATATATTATTATTATTTATTAAATATAATATTAACATATATTCAACATGATGATAATAAAAAATAAAG
>LE_HBa0245B16_T7_380056 (trimmed for quality and cloning vector)
TT

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
 Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
2.58518
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0245B16
Clone
Clone name
hba-245b16
LE_HBa0245B16
C12HBa0245B16
P245B16
Clone type
BAC
Contamination
none
Estimated length
101,863
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found