Clone Read LE_HBa0245D03_SP6_380193

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0245D03_SP6_380193
Primer
SP6
ID from Seq. Facility
LE_HBa_245_D03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
540 trimmed for vector and quality, 834 raw
Sequence
>LE_HBa0245D03_SP6_380193 (raw untrimmed)
GCTAGACAACCTTTCTCAACTTAGATAAACCAGCAACCAAATATATTTTCCCTCTACCCTCTACTTCCAAACACAAGGATTGAAGGCTCTTAAGCTCTGC
AAGTGAATTACATAATTGATTCATGTCTAGGTTATCAGCACTTCCAATGAGAAAACCAACTTTTTGGAGCTGAGTCATTCTAGTCAGGTTTTTATGGTGC
ATCCAGTGATGAACAGGTATGCTGCCTAGAGTTTGGAGATTGTTAGGTAGGTCAATCTTCAATAGGCTGGGGGAATTTATGTAACCAAGTATATGCCGTA
AGTTCTCTAACTTCCATAAGACATTAGGAACTTTCACAGAATAAAACCTAGACATGGGCATATCTATTGTTTCCAAGTTTTGCAGACGACTTATCGAATG
GGGAAACTTCTTAATACATGTCTTCCATCCTATGCCTAAGTACTTCAAGGAACATAGTTTCCCAATACTATCTGAGATCACATTTAAACCAGGAGAGTCT
ATGTATAGCACTTTGAGAAGTTTGAAACTACTTGTACAAATACACTTTAGGTTAACTTAGTTTAGCAGATGAATCATAGCATACAAGGGATCTTATATAC
GATTTTGAATTTCCCAAATATTCGTACCTCTCGAGTGTAATATAAAGGGAACCGGTGCCCAAAATTCCGAGAGGGGATATAGATGGGATTATCTACCATC
TATAAACTTTTTCTTCCTTGTGCCTGCATATTACTAAAATTTTTCTTTAGGAAATTCATGGAATCCGGGTAACTTTTTCAACTTTGTACTCCCTGTCCTA
CTTTGCCAATTACATATTAATATTTTTTTTACCG
>LE_HBa0245D03_SP6_380193 (trimmed for quality and cloning vector)
ACTTAGATAAACCAGCAACCAAATATATTTTCCCTCTACCCTCTACTTCCAAACACAAGGATTGAAGGCTCTTAAGCTCTGCAAGTGAATTACATAATTG
ATTCATGTCTAGGTTATCAGCACTTCCAATGAGAAAACCAACTTTTTGGAGCTGAGTCATTCTAGTCAGGTTTTTATGGTGCATCCAGTGATGAACAGGT
ATGCTGCCTAGAGTTTGGAGATTGTTAGGTAGGTCAATCTTCAATAGGCTGGGGGAATTTATGTAACCAAGTATATGCCGTAAGTTCTCTAACTTCCATA
AGACATTAGGAACTTTCACAGAATAAAACCTAGACATGGGCATATCTATTGTTTCCAAGTTTTGCAGACGACTTATCGAATGGGGAAACTTCTTAATACA
TGTCTTCCATCCTATGCCTAAGTACTTCAAGGAACATAGTTTCCCAATACTATCTGAGATCACATTTAAACCAGGAGAGTCTATGTATAGCACTTTGAGA
AGTTTGAAACTACTTGTACAAATACACTTTAGGTTAACTT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.967582
Expected error %
0.154221
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0245D03
Clone
Clone name
hba-245d3
LE_HBa0245D03
P245D03
Clone type
BAC
Contamination
none
Estimated length
94,466
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found