Clone Read LE_HBa0245G17_T7_380555

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0245G17_T7_380555
Primer
T7
ID from Seq. Facility
LE_HBa_245_G17-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
2 trimmed for vector and quality, 1561 raw
Sequence
>LE_HBa0245G17_T7_380555 (raw untrimmed)
TATATTAGATGAATAGGTGAAGATTGAGGGATAATAAATGATTATATAAAAATTAAATTATATATGTAACTCCTTTTTTAAAGAGGGGGAGGAATANATT
TTATGATAGAATTTAGTTAATATATATTGTGTTATATATATTCCGCTGTTTTTGAGAGAGGGGGAGNTGATAAATTATAGTTATGAATGTTGTTTAAAAG
ATATAATGTGTAATATGTTGTATATTGTGTATATTATAGTATTGATAAAAAAATTGTTAGATGAGGGTGAAATATTGGAGTTTTTTGATAATGAAAGATA
TAGATTATAATTAGAAATGTTGAGATTATAAATTATTATATTGTATGTAGATTGAAATTATAGATAGTAGAATTGATAATAAGATATTTAATAATTTAGT
ATAAGGAGACGTGTATAATATGGAGGAAAATATATGATAAGTATGAGGTATAGAAATTTAAATAAATGTATATATAGGTGTATATATATGAGATATAATG
AATGATAATTGAGAATATATTTGAGATAGTTAAAATGGTAGAGGATTAAATTTGTATGATAATAAGGAGATATATGGATATGGTAAGATATAATTATAAA
TTATAATTTAATATATGATAGAGATATTATATATTAGATAATTTATGATGATTTTAAGAAGATGATGTAAGGTATAATATATAATAATAATGTAGTGATT
ATGAATAGATAGTATTTATAAAATGAGAATAATTAAGATTAATGATATGTATATGTGTGATAGTTTGTGATGTATTAGTAATTTATAATTTTAATGAAGA
TAATTAATTAGGTAAAGAGTTATGTATGATGATGATGATGAAATATGTATTTTTGAGTGAGATATAGTAATAGTAGATGATTAGAATGATGAGAAATATT
GAAGATGTATGTAATATATAAGATAGTATGGTGTATGATTATAATGTTAATAGAGGTAAATGAGTATGATAATAGTTGTAGAATTAATTAGTATTATGGT
GAGTTTATTGAAATAATAAGATAGATAGTATTGATATGGGTAGATTATTGTATGATATAATATTAATAAGGAGATAG
ATATTATGTTTATAAGTACTCAT
ATGTATGTTTAATTTTATAAAGTTATATGATATATTTATGGATTTATTGTATTAAGATTAATGTGTGTAAAGAATTGACATATTAGAGGATTAGAAATGA
GAATGGATAATATGAATGAAGAATAAAATTATAAATATGATTAGAAATAAGATAGATGGAAATGGTGGTGATAAAAATAAAGATGTAGTAATTAGAGAAT
AAGAAAATTGAAGATAGAGAAGAATATGATAGAGAGATGATGATAGTGGTTTATGATAATATTGGGATTAGAATGATAAAATAGAAAAGTAAATAATATA
AATAGAGTAATAAAGAGAGAGTATTATGATAAAATATGTTTGTGATTGAGAGATATGGAATTGGATTAAGATATAGATAGTGAGAAGAAGATATATGTAT
AGTGCATATGAAATAATGAATTTATGATAGATTATGATAATGAGAATAGATTAAATATGAA
>LE_HBa0245G17_T7_380555 (trimmed for quality and cloning vector)
AT

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.57142
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0245G17
Clone
Clone name
hba-245g17
LE_HBa0245G17
P245G17
Clone type
BAC
Contamination
none
Estimated length
111,042
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found