Clone Read LE_HBa0114C15_SP6_38140

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0114C15_SP6_38140
Primer
SP6
ID from Seq. Facility
LE_HBa_114_C15-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
563 trimmed for vector and quality, 790 raw
Sequence
>LE_HBa0114C15_SP6_38140 (raw untrimmed)
AATTTAAGTTTGTTTCCTGAACCTGTTTGGCGTACGATGAACTATACCAAGGAGCTTAAATGCCGATGGAGGAGTCGAAGGATAAATAAGACAAGAGAGT
TGAGAATAGTGAGTAGTCTGGAGAACAGTCGCTCTTTGCATTATGTACTAAAATGGATTGATGTAGTTCCAGATGTTTTGATGGAGTAAAGGATCATATA
CTCTGTGCTAAGTACATGTCTCAAAATCTTCCCCCGTTTGTAGGCTGAATTCTGTTAACATTTATGATGACATTTTGGATATGATTGACTCCTTATAGTT
TTATTAGAAGTGGGTCTAGCTCTTTTGTAATTTTGTCAGCAGTATCTTAGTGCTGTTATAAAATAAAATTCCTTCCAGAAATAAGAAGTCTCATGATGTC
AGAGTTTTCTGGATTATTCTTTTGCAAATGTTTTCTTTGTTGAAGAAGTTGTAACTTCCAAATACTACTCTGTGCAGCTTCAAAAACATTTAAGCGCGGA
AAATCATCCATCCCCATAAATTCAGCACAGGTTTGTGAGCTTGCTATGATGCATATCCTTATCATGTGTTTTGTATGATTATATCTGGGTTTTGATTGTT
CAATATCTGCTTTCTGATTGTCTACTGCGATACATGAAGAAATATGACTGGTTTACAATACTTTGAACCAAATCCTATCAGAAAGGGTCCCCTTCATTGA
AATAAACCTTGCTATTTTTCCCCTTTAAAAGGAAAAAATATATTGTTTTGGTACTAGGAGTTAATCTCGTTAAATCCATCTACTTGACCC
>LE_HBa0114C15_SP6_38140 (trimmed for quality and cloning vector)
GTACGATGAACTATACCAAGGAGCTTAAATGCCGATGGAGGAGTCGAAGGATAAATAAGACAAGAGAGTTGAGAATAGTGAGTAGTCTGGAGAACAGTCG
CTCTTTGCATTATGTACTAAAATGGATTGATGTAGTTCCAGATGTTTTGATGGAGTAAAGGATCATATACTCTGTGCTAAGTACATGTCTCAAAATCTTC
CCCCGTTTGTAGGCTGAATTCTGTTAACATTTATGATGACATTTTGGATATGATTGACTCCTTATAGTTTTATTAGAAGTGGGTCTAGCTCTTTTGTAAT
TTTGTCAGCAGTATCTTAGTGCTGTTATAAAATAAAATTCCTTCCAGAAATAAGAAGTCTCATGATGTCAGAGTTTTCTGGATTATTCTTTTGCAAATGT
TTTCTTTGTTGAAGAAGTTGTAACTTCCAAATACTACTCTGTGCAGCTTCAAAAACATTTAAGCGCGGAAAATCATCCATCCCCATAAATTCAGCACAGG
TTTGTGAGCTTGCTATGATGCATATCCTTATCATGTGTTTTGTATGATTATATCTGGGTTTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.952023
Expected error %
0.498301
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0114C15
Clone
Clone name
hba-114c15
LE_HBa0114C15
C04HBa0114C15
P114C15
Clone type
BAC
Contamination
none
Estimated length
103,679
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found