Clone Read LE_HBa0204A16_SP6_382512

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204A16_SP6_382512
Primer
SP6
ID from Seq. Facility
LE_HBa_204_A16-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
663 trimmed for vector and quality, 920 raw
Sequence
>LE_HBa0204A16_SP6_382512 (raw untrimmed)
ATGATATGTTGACGCAACCCCGTCAGAGGAGAGGAGATGGGCAAGTAAGATTTGGAGGCAAAATCATAGTCCGAATATTTATGAGATGGGGTCTGGAAAG
TTCTTGTTCAAGTTTGCGATAAGAATCACAGCGGAACAGGTGATTGTAGGCAAATGGGTCTGGAACAACTCAAAAATCTGGCTGCATTGGTGGACTCCCA
CGATAGTGGCCACAAATTGGAAGACTAGACGAGCTCGACCTGGACTTGGGCCGTTGGTCTTCCACTGCATCTCTGGTCGCAAACGACTTTCAAAGACATC
GGAAACTTCTGTGGTAGTTGGATCATAACAGAGGAAGAGACAACTAAGAAACCACCTTAAATGGGCGAGAAGCAGAGTTGAAGGAGGCAGGTTTTCCCTC
TTATTTGCCACGTTAACCTATGGAAAATAATTTTTTGTTAGTATTTTCCTCCAATCAGAGAGCCCTCGATTTTTGTCTCACATTATTTCCTGGCTAATGT
CATCATTGTTATTCCCCTTTTCCCTCCTTTTTCATTTTTACCTGTTTCAACTCCTTCTCCCATCTACACCTTTTAAGGCCCTTATTTTTTTTTATTTTTT
TTTGAAACGGGTAAAGTTGTATTCTTCAGCATTAAGGGCATGCTGGCCACCACTAAAAAGTGTCAATTACAAACTTCCTATCAAATCTACAATCTGATCT
GTATCAACTATGCACAACTGTTTACACCCAAAAAGTATATATACTATACCATTCCAGTAGTAGAATTAGTTTTGTCCTTGAAAAAAAACTGGCCCTCTGT
ACCAAAAAGTCGAAACTCTTAATATTCCTTGCCCCATTTGGCTGGCTAAAAAGGTATGGGAAGGGCCCTCAAAACCCCTAGTTTTTCAGTTCTCCCCTGG
GTTGGGAAAATTAAAAATTT
>LE_HBa0204A16_SP6_382512 (trimmed for quality and cloning vector)
CCCCGTCAGAGGAGAGGAGATGGGCAAGTAAGATTTGGAGGCAAAATCATAGTCCGAATATTTATGAGATGGGGTCTGGAAAGTTCTTGTTCAAGTTTGC
GATAAGAATCACAGCGGAACAGGTGATTGTAGGCAAATGGGTCTGGAACAACTCAAAAATCTGGCTGCATTGGTGGACTCCCACGATAGTGGCCACAAAT
TGGAAGACTAGACGAGCTCGACCTGGACTTGGGCCGTTGGTCTTCCACTGCATCTCTGGTCGCAAACGACTTTCAAAGACATCGGAAACTTCTGTGGTAG
TTGGATCATAACAGAGGAAGAGACAACTAAGAAACCACCTTAAATGGGCGAGAAGCAGAGTTGAAGGAGGCAGGTTTTCCCTCTTATTTGCCACGTTAAC
CTATGGAAAATAATTTTTTGTTAGTATTTTCCTCCAATCAGAGAGCCCTCGATTTTTGTCTCACATTATTTCCTGGCTAATGTCATCATTGTTATTCCCC
TTTTCCCTCCTTTTTCATTTTTACCTGTTTCAACTCCTTCTCCCATCTACACCTTTTAAGGCCCTTATTTTTTTTTATTTTTTTTTGAAACGGGTAAAGT
TGTATTCTTCAGCATTAAGGGCATGCTGGCCACCACTAAAAAGTGTCAATTACAAACTTCCTA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.978267
Expected error %
0.33372
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204A16
Clone
Clone name
hba-204a16
LE_HBa0204A16
P204A16
Clone type
BAC
Contamination
none
Estimated length
74,660
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found