Clone Read LE_HBa0204A16_T7_382514

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204A16_T7_382514
Primer
T7
ID from Seq. Facility
LE_HBa_204_A16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
84 trimmed for vector and quality, 932 raw
Sequence
>LE_HBa0204A16_T7_382514 (raw untrimmed)
TCCTAGTAACTCTCTTTATGAAATGCTCTTGAGTGGTATGGTCTACCTTCTTTGTGGCGGTGTTCACTTGATGAATTTGGATATACTTGGTATGTATTGT
ATGGGTGGCTTTGAAGTCCTAATGTGTCAAATGAAATGAGAATGAAAATAGTTCATGGAATGTGTAGAATCAGCAGAAATCGTGGATGTCCGGACAACAT
TCTTCGGAGAGAATATCAGTGACTGCGGGAAACACGCAAGTGGCTGAGGATGACCTTCTGACACTACTCGCCATGATAGCTACAGGAACGACTGAGCGCC
AATAGTCATAGCATGACTCGGTGAGTACGTGACAGACAGTACGTGCCCGAGTGAAAATCAGTGATCTCCAACAGGCTTCCCAACGACACAAACAGATCGC
TCTTGCTCCGTAACGGACTAACGACTATTTCAGCCTACGGCGAAATGAGTCGCAAACAACCATTGATAGTTTAGCTCAATCACATCCGAAATAGTACAAC
CTAGACATATCTTACTGGGACTCACACTTCGTCGAGACCTCTAAAAACTCATCTCCCGCTTCAAATTCAAATTGAGATACAACGCAATGGGACTCTCCCT
CATCTCTTGCTCTCCCATTACAATTTTTCCAAACATTTAATATAACATTCGACTTTAATCTCAGTCTAACTTTGCCTAACATCCAACCATTTTCACTTTG
TCCCTCCGACTTTTAACCCTTTTCCTTTCTCTCCCGTCCCAACGCCCTCGCACCCCCTGTGATTTACTTTCCCATTAACCTATACCACCGTCTACCCGCG
CTAATCTTATCATTCTTCTGCACTATCTCCCTCTATCACCCTAAATATCCCCTACTCTCCTCTACCCATTTGTTCCTCAATGCCACCCTTCCTCCTCCTA
CCTCATCGATTACTCGACCCCCTACACTCCAA
>LE_HBa0204A16_T7_382514 (trimmed for quality and cloning vector)
CTCTTGAGTGGTATGGTCTACCTTCTTTGTGGCGGTGTTCACTTGATGAATTTGGATATACTTGGTATGTATTGTATGGGTGGC

This is probably not a useful sequence.

Problems:
  • Short cloning insert
Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.88963
Expected error %
1.06109
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204A16
Clone
Clone name
hba-204a16
LE_HBa0204A16
P204A16
Clone type
BAC
Contamination
none
Estimated length
74,660
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found