Clone Read LE_HBa0204A17_SP6_382516

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204A17_SP6_382516
Primer
SP6
ID from Seq. Facility
LE_HBa_204_A17-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
13 trimmed for vector and quality, 955 raw
Sequence
>LE_HBa0204A17_SP6_382516 (raw untrimmed)
AACTGGGCACCCGCGTATGAATCACGTAGGAGGANTGCCTCATGCTCGTTATTTACAGGTGATGGTCCCGGTTATGGTATATTGTGAGATCCACCTTACG
GCAACTTTTTGCCCTCCCTCACTTATCTCGGCATACCTCCCATGTGCTCACTGCTGCTCTACACCGACATTAACCACATCCTGCCGCCTAGTTACCCACC
CTCACATCACCATTTGTGTAATGGACCCCTCTGCGTTTTCGGTGCTCGTAGTGATAGGTCTTTTACCTAGCGTTCAAATAGCCCTTGACTCACTCCACTC
CTGCTCTTTCTCACTCTGGGATCCTGCAACTCCACTGGTCTGAGCAATCCACACAATATCCACCCTTAACTCATGGCTTTGCCGATGAGACAAATTACAC
CTTACCCATTGTAGAGACTGGGCCATAAGAAGGTTGTCCACTGCCTTAGCCGCCCTCTACTTATGCCTGCGGAATAAGATGAGGCGCGCATGTCCAAAGA
TGTACCAAGGCCGACACATAATCCGAAAATTACATCTTATGGGGTGCACAAATTAGGACAAAGATCTGCT
CTTCTCATTTGGATGAAATCACGATAAAAT
TCATTGGGTAGCCCATCTTTAAGACACAATGGGGTACAATGCAAAATGAACTACGATCCGTACCGAGTTTTCCGTTACCTCTAACCTTAAACCGGACTAA
TGTGTCTTGTTTTTGACATCCTGCCTATAGTGTACCTTGTACCAAAACTACCTTCCCTACACATGCCATCGCCTTCCTTCTACCGGGAATTAACAAAATT
CATAACTTCCCAAATTATACCCCCAAGGATTTTGCCTTTTGGCCAAACCTTCTATTAACCCGCTTTGAAAAACCACACCTATACTCTCCAAATAACATAG
GCCCAAAAAAATGTCTTCAAATATTCCCCACTTAAAAACGACCAAATTCTTTGCA
>LE_HBa0204A17_SP6_382516 (trimmed for quality and cloning vector)
CTTCTCATTTGGA

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for chimera
  • Not screened for contaminants
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.650335
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204A17
Clone
Clone name
hba-204a17
LE_HBa0204A17
P204A17
Clone type
BAC
Contamination
none
Estimated length
111,015
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found