Clone Read LE_HBa0232A20_SP6_382529

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0232A20_SP6_382529
Primer
SP6
ID from Seq. Facility
LE_HBa_232_A20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
601 trimmed for vector and quality, 957 raw
Sequence
>LE_HBa0232A20_SP6_382529 (raw untrimmed)
NNNGGTGTCGGATGATGTCTAGCTCCAAAAAAGATCTGTAGCCTCTTCCTAAGGTATACAGTGTAGGAATCCGAGAAGAGTTCTACATTATTTACAGGGG
TCAGTTTGGACCAACTAAAAAGGCTAACTAGACATTTGCCTCGCCAGAGATCTCTAGAAATTGAAATTCCGTCAAAACATCTTTTCTTCCTCTCTGTCCA
TAAACACCAGAAGATAACACCAAGGATCAGCATCGACGTACTCTTGGTGGTTTGTTAACATCCCGTGAATTCCAACTTTCAAGAGCATACCTAACAGATG
AAAGGCATGACCCAAGAAAGGCCAAAAAAACAACAAAACATATTCCATAGATGTGAGGCAGCTGGGCAGTGCAGAAGCAAGTGGTTGACACTTTCTGTGT
GCTTGTGGCATAAATAGCATCGGTTAGCAATGTATTCTAGTGTCTATAAATAGTATCTCAATGTAATAATGTAGACACAACAACAATTCAATAATATTCT
TTTCATGATATTTACCCTTGTCTAATCTTTGTTTTTTCAGGACCTATGAATGCTGGCTCTTTTGCTTATCATGCTCAAGGCAACTATAACTCGGCTCAAA
GAACATATTGGCCACGAGGAGTCAATGCCATTCCTCTTGGAATCCGTAGGAATACTAATCCCTTTTGCATGCCACAGGGGGACTCCACGTTGGGTAGCTC
TCTTGGCACACCTAAAAACTACTCTTTGCCTAATTCACCGCAAATGGGGGGAATTTCCGGCCATGGTTCTCCCTCAAGTAAGGGGAGCCTGGAAGCCCAA
ATGGGGCAAGGTAGCCCCCTACCAGGGGTCAGGGATCCGAAAGCCAGGGTTTCCCAAGGGTTCCAGAAGAGGGCTAGGGGGAAATTTCAAATTCTTACTA
TTAAGGAGGTCAAAAGGAGGGAAAAACCCCGGGGAAAACTCTTTGACACACCGGTTN
>LE_HBa0232A20_SP6_382529 (trimmed for quality and cloning vector)
GAGAAGAGTTCTACATTATTTACAGGGGTCAGTTTGGACCAACTAAAAAGGCTAACTAGACATTTGCCTCGCCAGAGATCTCTAGAAATTGAAATTCCGT
CAAAACATCTTTTCTTCCTCTCTGTCCATAAACACCAGAAGATAACACCAAGGATCAGCATCGACGTACTCTTGGTGGTTTGTTAACATCCCGTGAATTC
CAACTTTCAAGAGCATACCTAACAGATGAAAGGCATGACCCAAGAAAGGCCAAAAAAACAACAAAACATATTCCATAGATGTGAGGCAGCTGGGCAGTGC
AGAAGCAAGTGGTTGACACTTTCTGTGTGCTTGTGGCATAAATAGCATCGGTTAGCAATGTATTCTAGTGTCTATAAATAGTATCTCAATGTAATAATGT
AGACACAACAACAATTCAATAATATTCTTTTCATGATATTTACCCTTGTCTAATCTTTGTTTTTTCAGGACCTATGAATGCTGGCTCTTTTGCTTATCAT
GCTCAAGGCAACTATAACTCGGCTCAAAGAACATATTGGCCACGAGGAGTCAATGCCATTCCTCTTGGAATCCGTAGGAATACTAATCCCTTTTGCATGC
C

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.97155
Expected error %
1.11002
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0232A20
Clone
Clone name
hba-232a20
LE_HBa0232A20
P232A20
Clone type
BAC
Contamination
none
Estimated length
96,217
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found