Clone Read LE_HBa0204F12_SP6_382977

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204F12_SP6_382977
Primer
SP6
ID from Seq. Facility
LE_HBa_204_F12-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
14 trimmed for vector and quality, 909 raw
Sequence
>LE_HBa0204F12_SP6_382977 (raw untrimmed)
TACCCTTTAAGGGGACGGATGATGAGATTGATTGGTATGCGTCCCTTATGCGAGTTGCCTGTTACTATATGATCCACACGAAAAGTTGAAGGATGCTGGA
AACATTTCTCTAAGGCATTACTTACTAACGACGACTGAAATATTATCCTAGGAGCTGTTGGGTACGTATTAGCATGGTCTACATGGTGAGATATTCACCG
AGCTTAAGATGGGAAAATATGCTTTAACCCAGTATGTTTGCTCCTCCAGACTTAAGCTGAGGTTAGATCTACGCTAAGAGTACAATATGACAATCTGCCC
CCACCGAGCTAAAGTTAACCAGTATGTACTGGCCACACTACTGTTATGCATAAGGAGTGCCACCATATTCTTGAAGAAGAACTGCACTTAGGCAAACTAG
TGAATGTTTATGCAAAACGGCATACAAGCTAATAATGACCACAGAAGGAGCAATGATGGGACATGAATAGGTGACAATATCATAACGTCAGATGTGAAAG
CGAACAAGGACA
AAGACCCCATGTAGTTTGACTTGACAACGATAACACTGAAGCACGAATGCAAGCGTTTGAACACAGGATGACTATACTGTCGATGTAC
GATGTGCTCCTAGGGTGGACGTACTTCAAGATCATATCCTGGAGCAAGCACCTACCGCCTTTGCTCACATTCATCCGGTTTCCACAAATATATACCGCCA
TCAGAAAGAGGTCCTTTGTATGGAAAGCTTGGAAGAATGAATTCGTTTCTTTTTACCTCGAATTGGCTTTTTAACCTAATTGGGACCCCCCAAATCAACA
GCCCTTGAGATATAGTATGAATAAAAGCACCTTTTATAGCTCTTAAAAAAATAAATAAAAGATGTTTATTTTCTCAAAACGCATAGGGGTTTGGTCACCA
ATTTCATTG
>LE_HBa0204F12_SP6_382977 (trimmed for quality and cloning vector)
AAGACCCCATGTAG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for repetitive elements
  • Not screened for contaminants
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.708529
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204F12
Clone
Clone name
hba-204f12
LE_HBa0204F12
P204F12
Clone type
BAC
Contamination
none
Estimated length
84,280
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found