Clone Read LE_HBa0204F12_T7_382979

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204F12_T7_382979
Primer
T7
ID from Seq. Facility
LE_HBa_204_F12-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
6 trimmed for vector and quality, 1016 raw
Sequence
>LE_HBa0204F12_T7_382979 (raw untrimmed)
NGTAGGACGGGGATCTCAGAGTCGACTGCAGGCATGCAAGCTTAAAAAAAGATAAGCTTGTGAGACCTTTTAAGGGAGAATGGGTAGGTTTGAGAATAAT
CAGGAGCCCCTATAAAGAGTAGGGTAATTGGAGATGAAATATAGAGATAATAGTAGGTTGATCAAGAAAATAAAATATGCATCTGGTGTCATATTAAATA
CTTATTATTATAATAAGAGATGGGAATATGGGAAGGGAATAAGTTTTCAATCATAGTGAGTAGAAAATGTTAGGATAGGCGAAGGGTAAGTACATATAAG
AGAAATAAGAAGGGTGAATTGAGTGCACTGAAGACTTGAGAATGAGGGGAAAAAAATGTTGAGTGTTTCACCTAGC
TCTATGTGAGCTGCAATGCTCATG
AGTAAGGTTATAAGGAATACATTTACTGGGCAATGAGCTTGAAATGAGAAAGTGACGCTGGATCGATGATATTACTTCTTCGAACATGTTTTACAATTTC
ATTTGCCATATATCCGTCAAAAATGTTTATCATTATTAGCCTTGGAATAAAGATAGACATTAGTAGTCATTTCGAGCTTGGCGTAATTTTGTATAACCCA
CACTGAATTGTGAGCTTTGCGCTTTAAGCCTCTACGGACACTTAGAACTACTTCTAATTGCGCATTATTCGACTATGATCAGCTAGGGCCTTCATAGATA
TGAAAGTTTAATTTTAAAAAGTCCAAACTAAATGAACGCTTTATCAAATAAGGAAAATTATTAATAGGAAGAAAAAAATCAATTCATTACTTACTAAAAG
TTAAAAGCAATTAACCCACTATTTTTTCCAATTTAAGCAAAGAAGGGAAACACCCACCTGGCCAACTTAGAATAACCATCCCTGGAAAGGTTCCCTTTGT
AAGGAGAAAGATTAAAGGGAATCCGAATAAACATCCAAGAAAGGGTGAAATTAAATTGGCAACACTAAAAAGGGATTTCTATTTCCGTCGAACAAAAAAC
GGAGGAAAATTTTAAN
>LE_HBa0204F12_T7_382979 (trimmed for quality and cloning vector)
TCTATG

This is probably not a useful sequence.

Problems:
  • Low complexity
  • Short cloning insert
Warnings:
  • Not screened for contaminants
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.434887
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204F12
Clone
Clone name
hba-204f12
LE_HBa0204F12
P204F12
Clone type
BAC
Contamination
none
Estimated length
84,280
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found