Clone Read LE_HBa0232J11_SP6_383362

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0232J11_SP6_383362
Primer
SP6
ID from Seq. Facility
LE_HBa_232_J11-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
709 trimmed for vector and quality, 983 raw
Sequence
>LE_HBa0232J11_SP6_383362 (raw untrimmed)
CCCCCGCATCTGTCCTTGCTGTCAGAAGGATTATAAACTGCGTCTTATATGATGATGGATCCAGTCTCAACATATTCCCATTATCGACTTTAAGGCAATT
AAAGTTTGACTTGGGAAAGATTCAACAAAACCATGTCAATATAAGGTCACTCGATTGGGTACAAAGAGACACACTAGGGCAGTAAATTTGATCATTTAGA
TGGTTCCTGCAGAAGTCAACATGGAGTTTTAGGTTTTGGACATTAACACTAGCTACAACCTTCTTTTGGAAAGGTCGTTCATCCATATGATTGGAGTTGT
GCCTTCTACCCTTCATCAACTACTGAAATTTGCTTGGAAGGATCAGAAGTTGTTTTTAATGGAGAGGGAAGGAATTCCAATGGGTATGCATCGATCATTG
ATGAAGTCTCTCGAGGGAGTGATTTCTACGAGATGGAGCTGGTAAATGCCACCGATGAAAATTTGGCCCCATAGCCCTCAATGCCTGCCGTATACAAAAT
TATTGCTACTGTGATGCTTCAGAATGGATTTGAGCTATGTTTCGGATTATGAAGGAATTTCCAAGGAATTGTCGAGCCTATCAAAGTTCCCAACAAAGGA
GCAAAGTTTGGTTTGGGGTACATCCGCACAACTGATGAAGCAGAGATGACGAGCCAAAATGTTGATCAAGAATTGGCTAGTCCAATTCCTCATTTGTACT
TGTCATTTCAAGTTTGAGAGTATGCTGATCATAATGGCCTTGGGAAAGGAGTCTGGGCCTTTATGAAGAGATTGATGTTGTCATAGAGGACGAGGACAAG
ACCTCCGATATCCGTGATGCTGAGCTAGGGGAGAAACTACAGAATTGACCCTCACACCGCTCTTGAATCCCCGAACTCTTGGTAAAAAAGGACTATGGTT
TTTGCCTATTTGGAAAATCGGTGGTAATTCCGGAAAAGGCCGGAAAACCCCTATTTGCCAATTCCTTGAATGGTTGAAATTTG
>LE_HBa0232J11_SP6_383362 (trimmed for quality and cloning vector)
GATTATAAACTGCGTCTTATATGATGATGGATCCAGTCTCAACATATTCCCATTATCGACTTTAAGGCAATTAAAGTTTGACTTGGGAAAGATTCAACAA
AACCATGTCAATATAAGGTCACTCGATTGGGTACAAAGAGACACACTAGGGCAGTAAATTTGATCATTTAGATGGTTCCTGCAGAAGTCAACATGGAGTT
TTAGGTTTTGGACATTAACACTAGCTACAACCTTCTTTTGGAAAGGTCGTTCATCCATATGATTGGAGTTGTGCCTTCTACCCTTCATCAACTACTGAAA
TTTGCTTGGAAGGATCAGAAGTTGTTTTTAATGGAGAGGGAAGGAATTCCAATGGGTATGCATCGATCATTGATGAAGTCTCTCGAGGGAGTGATTTCTA
CGAGATGGAGCTGGTAAATGCCACCGATGAAAATTTGGCCCCATAGCCCTCAATGCCTGCCGTATACAAAATTATTGCTACTGTGATGCTTCAGAATGGA
TTTGAGCTATGTTTCGGATTATGAAGGAATTTCCAAGGAATTGTCGAGCCTATCAAAGTTCCCAACAAAGGAGCAAAGTTTGGTTTGGGGTACATCCGCA
CAACTGATGAAGCAGAGATGACGAGCCAAAATGTTGATCAAGAATTGGCTAGTCCAATTCCTCATTTGTACTTGTCATTTCAAGTTTGAGAGTATGCTGA
TCATAATGG

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970886
Expected error %
0.730429
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0232J11
Clone
Clone name
hba-232j11
LE_HBa0232J11
C08HBa0232J11
P232J11
Clone type
BAC
Contamination
none
Estimated length
101,185
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found