Clone Read LE_HBa0204J20_SP6_383389

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204J20_SP6_383389
Primer
SP6
ID from Seq. Facility
LE_HBa_204_J20-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
669 trimmed for vector and quality, 969 raw
Sequence
>LE_HBa0204J20_SP6_383389 (raw untrimmed)
CGCTGGTACTGGGAGCATTTTATAGTAAAGAATTAGGGAAGATTTTATTGAAGTTGAGAGAAACCCTTTATGCTGTTATATAATGAGGAAAAAGTATTTT
GATGATTCACATGAGAT
CTTTCTCTGCATTTTTCCTTGAAATTATTCCTTAAATATGATCCAAGGTTGTTTATTAAAGCATTCACAACATGTGTCAAACA
TTTTCTCCCTTTTCTACTGGTCTTACGCAATCCAATTAGTATTAAAGTGCTGAGGAGAAGAGATCCCACAGTTGAATGACCTCGCGTAATGCAACAAGAG
ATGGTTAATGTCCTTTCAGCACTCTTGCACATACACCAACTCACCGTATTCCTTTCTTTCAGATTGTCGGCCATGGGATTCTTTTTCAAGCCACAGCTCC
TTCGATTATCGGCTGTGTGGGTTGTGTTTTGTGCCACACACCACGTGAAGAAGGTGACATATATGGCGCCTTGGTATTCCATATTTTCTTCTACTCGTCA
GTGTTGCTGCCCCAACTTTTTTCGGTAAAAATCCTTGTAGCCAACCGGCCCCTATCAACCTTCACATTCCCCTTCTCCTCTATGTTTAGATTATAAACTC
TGGGAAAGGATTCCTAACTTTCTTTGACTCTGAATTCTGGATTACCTTCCCGAACCTTATGTCCCATTTTTTTTCTTTCCCTGTTAGATCAGTCATTGCT
GCGCTTCTCACATATACAATAGCATGCATTAAACAGCATGCGTCTCCCCACACTATGTGCCTTTCAAGATATATGCTCTATTGCCATTTTCAATGATGTA
ACCAACAAACCTTGTGAACTCATTACTTGCTTCTTGGGGATCCCTTTTCCACAACCCTTCTAAATTGCCAAAGAAGCTTTCTGGGAACCAATTTGTCCAG
AAATAAAACTTTATCAGGAAAAAGAACCATTCCATTTTGACCATGGATCTGGAACAAGATTAATTGTTT
>LE_HBa0204J20_SP6_383389 (trimmed for quality and cloning vector)
CTTTCTCTGCATTTTTCCTTGAAATTATTCCTTAAATATGATCCAAGGTTGTTTATTAAAGCATTCACAACATGTGTCAAACATTTTCTCCCTTTTCTAC
TGGTCTTACGCAATCCAATTAGTATTAAAGTGCTGAGGAGAAGAGATCCCACAGTTGAATGACCTCGCGTAATGCAACAAGAGATGGTTAATGTCCTTTC
AGCACTCTTGCACATACACCAACTCACCGTATTCCTTTCTTTCAGATTGTCGGCCATGGGATTCTTTTTCAAGCCACAGCTCCTTCGATTATCGGCTGTG
TGGGTTGTGTTTTGTGCCACACACCACGTGAAGAAGGTGACATATATGGCGCCTTGGTATTCCATATTTTCTTCTACTCGTCAGTGTTGCTGCCCCAACT
TTTTTCGGTAAAAATCCTTGTAGCCAACCGGCCCCTATCAACCTTCACATTCCCCTTCTCCTCTATGTTTAGATTATAAACTCTGGGAAAGGATTCCTAA
CTTTCTTTGACTCTGAATTCTGGATTACCTTCCCGAACCTTATGTCCCATTTTTTTTCTTTCCCTGTTAGATCAGTCATTGCTGCGCTTCTCACATATAC
AATAGCATGCATTAAACAGCATGCGTCTCCCCACACTATGTGCCTTTCAAGATATATGCTCTATTGCCA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.964016
Expected error %
1.34707
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204J20
Clone
Clone name
hba-204j20
LE_HBa0204J20
P204J20
Clone type
BAC
Contamination
none
Estimated length
108,276
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found