Clone Read LE_HBa0204K01_SP6_383408

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0204K01_SP6_383408
Primer
SP6
ID from Seq. Facility
LE_HBa_204_K01-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
545 trimmed for vector and quality, 939 raw
Sequence
>LE_HBa0204K01_SP6_383408 (raw untrimmed)
TATACGATCTGCAACCGCGAAATGTCTACATGTGGGGTGGGGGGGTGGGGATTCTTCAATCGTTTAATGATAGTATTACTACACACATTAACTCCAACAT
CCTCTCCTTCATTCATCATCAAACATAGCCCTGGATTTCCACTCAAGTCCAAATTCCTTCCAAGTCTTTTCAAAAAACTTGTATTGAATGGTACAACACC
ATCTAACAAATTCCTACTCAAATTCAAGTGATACATGTGCGTTAATCTTGATAATTCAACCGGTATCTTGCCCGTTAATCGATTGTTTTGTAATGACAAT
GTTGTTAAGTTCATGAGTTGTGAGTAACTTGATGGTATTTCCCCCGAGTAACCTGAACTTGAAAGGCTCAATTCTTGAAGTTTATGTAATTGGCTCAATT
CATCAGGCAATGTTATGAACATCATTGGATTGTCATCCATCAAAAAATATTGAAGTGCTTGAAGTTTGTGTATCCCTTTTGGGAAATTACCACTCAGCTT
GTTGTTACTAAGTGCTAAGAAGTTTAAAGATTGTAACTTTTCAATGGTTTGAGGGATTCTGCCTGTTAATGTATTCGAACTTAAGTCGAGTTTCTGAAGA
GATTTGAGATAGCCTATTGTGAATGGAATTGGAATGGTTAATGAATTGTATCTTTAATTCTAAACCTATAAAGTTGTTGAAATTGCCTATTTGTAATGGA
AATTGGCCCATGAATGTTGTTTGTAACCTTAAATTCAAAATGAATTACTTGATATTGAATTTGCATAATTTTAAGGTTGGGAATTTATCATTAGAGGTCT
ATAATTATAATAATGTTACAGAATTTTAACTAAATTTAACTGTATAATATTTATAAATCTAAATTACCTCAAATATATAGAATATTTTTATACTAATAAT
TCGTCTTTTTATTTAAACCATTAATGTTTATACTATAAA
>LE_HBa0204K01_SP6_383408 (trimmed for quality and cloning vector)
ATGTGGGGTGGGGGGGTGGGGATTCTTCAATCGTTTAATGATAGTATTACTACACACATTAACTCCAACATCCTCTCCTTCATTCATCATCAAACATAGC
CCTGGATTTCCACTCAAGTCCAAATTCCTTCCAAGTCTTTTCAAAAAACTTGTATTGAATGGTACAACACCATCTAACAAATTCCTACTCAAATTCAAGT
GATACATGTGCGTTAATCTTGATAATTCAACCGGTATCTTGCCCGTTAATCGATTGTTTTGTAATGACAATGTTGTTAAGTTCATGAGTTGTGAGTAACT
TGATGGTATTTCCCCCGAGTAACCTGAACTTGAAAGGCTCAATTCTTGAAGTTTATGTAATTGGCTCAATTCATCAGGCAATGTTATGAACATCATTGGA
TTGTCATCCATCAAAAAATATTGAAGTGCTTGAAGTTTGTGTATCCCTTTTGGGAAATTACCACTCAGCTTGTTGTTACTAAGTGCTAAGAAGTTTAAAG
ATTGTAACTTTTCAATGGTTTGAGGGATTCTGCCTGTTAATGTAT

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.944099
Expected error %
0.56129
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0204K01
Clone
Clone name
hba-204k1
LE_HBa0204K01
P204K01
Clone type
BAC
Contamination
none
Estimated length
87,360
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found