Clone Read LE_HBa0228A02_SP6_387016

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0228A02_SP6_387016
Primer
SP6
ID from Seq. Facility
LE_HBa_228_A02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
733 trimmed for vector and quality, 875 raw
Sequence
>LE_HBa0228A02_SP6_387016 (raw untrimmed)
TCCTACGATCTTTTANACTCCTCAAAATCTTGCTCTCTTAGAATCTCTGCTCTTTCTCTTAGCCCTTGCCTCCCCAACCCTTTTGGCATACATCATTAAA
TGGGAAACGTTCATGTTGTCATGTAGCATGGCCAAATGGCACTCCTCTTATAAGTCCTCCGACACCCCCGTCACAAAGCGACTCATTTCATCTCTTGGAT
CGAAAACCAATGAAGGAGCATATTTCGACAACTTAGTGAACTCCAATGAGTATTCGTGAACACTCCTTCCTCCTTGGCGAAAATTGATGAACTCCACCAC
TTTTTTTCCCTCATCTCCCTAGGAAAGAACCAATCTAGAAAATCCTTCTTAAAGATCTCCCAAGTCAAAGGACCACCCCTCAATGGCCTATTATCTATCC
ATTGCACATACCATGCTTGTGCAACGTCCTTGAATCGATAGGTGGCCAACTCGACCTTCTCACTTGTGGACAAACACCTAGACAAAAGTGTCTTATAGAC
TTTATCAATGAATTCTTGGGGGTCTTTATCAACCTTAGACTCGTATACAGTAGGAGGATTCATCCGAATGAAATTTCTTAGACGGGAAGCCATAGTAGTG
ACTTATTGTTGAGGACGGGGTACAAACTCACGGTTGGCTTGGGCCGTCATAGCTTGGGCTTGTCAGTGAAGGCTTGAGCCAATTGAATTAGGTCAACCCT
TATATATCCATCCGTCAATGGTGGAGGATTGACTGGAGCTTGGTCAACATTAGTGTCTTCTTCCAGTGGAGGAACTTGCTCACTACAGGGAGAAGCTCCC
ACATTGGAAATTTCCTTTTCAAGTCTTCGAGTCGCATTCCTTCGAGTGTTCATGCTTCCTATTAGCACAACAATA
>LE_HBa0228A02_SP6_387016 (trimmed for quality and cloning vector)
CTTGCTCTCTTAGAATCTCTGCTCTTTCTCTTAGCCCTTGCCTCCCCAACCCTTTTGGCATACATCATTAAATGGGAAACGTTCATGTTGTCATGTAGCA
TGGCCAAATGGCACTCCTCTTATAAGTCCTCCGACACCCCCGTCACAAAGCGACTCATTTCATCTCTTGGATCGAAAACCAATGAAGGAGCATATTTCGA
CAACTTAGTGAACTCCAATGAGTATTCGTGAACACTCCTTCCTCCTTGGCGAAAATTGATGAACTCCACCACTTTTTTTCCCTCATCTCCCTAGGAAAGA
ACCAATCTAGAAAATCCTTCTTAAAGATCTCCCAAGTCAAAGGACCACCCCTCAATGGCCTATTATCTATCCATTGCACATACCATGCTTGTGCAACGTC
CTTGAATCGATAGGTGGCCAACTCGACCTTCTCACTTGTGGACAAACACCTAGACAAAAGTGTCTTATAGACTTTATCAATGAATTCTTGGGGGTCTTTA
TCAACCTTAGACTCGTATACAGTAGGAGGATTCATCCGAATGAAATTTCTTAGACGGGAAGCCATAGTAGTGACTTATTGTTGAGGACGGGGTACAAACT
CACGGTTGGCTTGGGCCGTCATAGCTTGGGCTTGTCAGTGAAGGCTTGAGCCAATTGAATTAGGTCAACCCTTATATATCCATCCGTCAATGGTGGAGGA
TTGACTGGAGCTTGGTCAACATTAGTGTCTTCT

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.97611
Expected error %
0.189072
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0228A02
Clone
Clone name
hba-228a2
LE_HBa0228A02
P228A02
Clone type
BAC
Contamination
none
Estimated length
111,448
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found