Clone Read LE_HBa0228H03_SP6_387656

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0228H03_SP6_387656
Primer
SP6
ID from Seq. Facility
LE_HBa_228_H03-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
726 trimmed for vector and quality, 909 raw
Sequence
>LE_HBa0228H03_SP6_387656 (raw untrimmed)
GCNNCCCAACCGCTNGTTATGAAAAAATTATTTGAAATTTGGGAGGAGTTAGCTGGTAAAAAAAGTGTATGAATTTTTCACAAACTTTATAGTGTAAGAG
CTAATTAAATTTTATTCTTTTTTTCTTTAAAGTTGCAAAAAATTCTTAACTATGGTGGATACATTCTAAAATGTCTTGATACATTACATTCCAGTTTCGT
ATACATACCTTTGTGTCTGATACATTACGTTTCGATTTCGAATACAATATTCAACGTCTTCATATATCACGTACATTCTGATACATTGCTTAAAGTGATG
TATCTGAGAATAGGAAAGGATAGAAACTTTTTTAATTCTTCAAATTGTAAGAAATTTTTGAGATTATAATAAAATAAATTGTGTATTTAGATTATTTTTA
CATTAATTTATGATGATAAAAAATGTAAAATCAAGGTGAAAGATATTATAACATGAGCTATTCAATGATATAGGTAGTTTAAAGTTGAATTGATTGTAAA
TTTAAAAAATAATTATTTAATTACTACTTTTTGTAGTTTGTCCATGATAGTAATTATTCTCAAATCAAGATGTCACATAAATAGCTTAAATATTCAATGA
AGAAATATTACATCTTAGGACATAACTAATAAATGCACTTTTCAAGGAGTGTGTTATTTAAAAAGAAAAATACAATAAATAATTTGGAGAGTGTAAATGA
TTTGGTGTTGGGTTAAATCAATCTCAAATCAGTTTAATTGATTTCAACATTATCACAAAATCAAATCAAACCACTTTTATAATCTATAGTGATATTTTTT
TTCCTTTTATATTTCCCTTACAATTAGAGAAGTATTCTTTTTTTCATCATTTGTCCAACTTCCAAACCCTTTATTTTGATGGGCTATATCATTTCTTAAA
ATTATGGAA
>LE_HBa0228H03_SP6_387656 (trimmed for quality and cloning vector)
ATTATTTGAAATTTGGGAGGAGTTAGCTGGTAAAAAAAGTGTATGAATTTTTCACAAACTTTATAGTGTAAGAGCTAATTAAATTTTATTCTTTTTTTCT
TTAAAGTTGCAAAAAATTCTTAACTATGGTGGATACATTCTAAAATGTCTTGATACATTACATTCCAGTTTCGTATACATACCTTTGTGTCTGATACATT
ACGTTTCGATTTCGAATACAATATTCAACGTCTTCATATATCACGTACATTCTGATACATTGCTTAAAGTGATGTATCTGAGAATAGGAAAGGATAGAAA
CTTTTTTAATTCTTCAAATTGTAAGAAATTTTTGAGATTATAATAAAATAAATTGTGTATTTAGATTATTTTTACATTAATTTATGATGATAAAAAATGT
AAAATCAAGGTGAAAGATATTATAACATGAGCTATTCAATGATATAGGTAGTTTAAAGTTGAATTGATTGTAAATTTAAAAAATAATTATTTAATTACTA
CTTTTTGTAGTTTGTCCATGATAGTAATTATTCTCAAATCAAGATGTCACATAAATAGCTTAAATATTCAATGAAGAAATATTACATCTTAGGACATAAC
TAATAAATGCACTTTTCAAGGAGTGTGTTATTTAAAAAGAAAAATACAATAAATAATTTGGAGAGTGTAAATGATTTGGTGTTGGGTTAAATCAATCTCA
AATCAGTTTAATTGATTTCAACATTA

Warnings:
  • Not screened for repetitive elements
  • Not screened for chimera
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.890981
Expected error %
0.200928
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0228H03
Clone
Clone name
hba-228h3
LE_HBa0228H03
P228H03
Clone type
BAC
Contamination
none
Estimated length
97,707
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found