Clone Read LE_HBa0229G16_T7_389135

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0229G16_T7_389135
Primer
T7
ID from Seq. Facility
LE_HBa_229_G16-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
7 trimmed for vector and quality, 1020 raw
Sequence
>LE_HBa0229G16_T7_389135 (raw untrimmed)
AGATTAANNNNNGGTAGGACGGCGACTCTGAGTCGACTGCACGCATGCTAGCTTGGTTATTTGCAGAACAAAAAATCATTGTAGCTTGGGCCCGGGCATC
TACCATTATACCCGCTATGATCCGACTTACTATTGCTATCCAT
AATGGAAAAGAGCCTTTCCCGATTTATTTAATGGACAGAATGGTAAGTCACGAATAG
GGACACTTTGCACCTACATTACATTTTAGAAGACATGCTCAAAGCGATGATAGATCTCTTCGTTACCAACCATAATCACAATCTACATAGCTTATGATTC
ACTCACTAGGAGACTGATCCTTATCTTAAGGACGATAAAAACAGCAGTATCATGCTTTAGGTGAACATATATCTATGTCTGCTGACGCAGCCCGAAGAGT
ACTTGATCAAATTCACGGACATTCCTAGTGAGGAAACCGCTTGACTGAAACGAAAACCTCGTGCCCTCTCTAGCTTGTTATCCCATTTTGAAATTGATTT
ATTGCTCCTGCTTCACATGCTAGTTACAATATGGTGTTCCAGCGAAACGCAATTCTAGTCTTCACTTGAGCCGAAGTCAATGAACGTACTACTGTGATGA
CACTGATACCTCTAGCTCGACGACGTAGTTCTCCGATAAGAAGATCGACCTGTCGACTGACAATTGTAACGAAAGATATATCTTTACATGATGACTATGG
CGAGATGTCTTCATTACATAAACAACATGCGAAACAAAATCTACAGCTATGACCAATCCTGATATGTTCATAGCAGGGGATTATGGGACAAAAAATCAAT
CCAGCTGTCTTCAGACTGCGTACATCCCAAAGCATCATTACCTTTGGCTTTCCAACCCCAAAAATTATTCTGAAGGGTTTCTACTACATAACGTTAATCC
CACTTTGTTCCAAAAATTAATTTCGAACAAAATATGACCACCTCCTGCGGGCATCAAAGGAAATGCCACCTATACCACATTCAAAAAAACAATCCGATCT
GATCTGGTCCAGAATCCTTT
>LE_HBa0229G16_T7_389135 (trimmed for quality and cloning vector)
AATGGAA

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
1.75834
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0229G16
Clone
Clone name
hba-229g16
LE_HBa0229G16
P229G16
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found