Clone Read LE_HBa0233H10_T7_390724

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0233H10_T7_390724
Primer
T7
ID from Seq. Facility
LE_HBa_233_H10-T7
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
8 trimmed for vector and quality, 1419 raw
Sequence
>LE_HBa0233H10_T7_390724 (raw untrimmed)
NNNNNNTTTTTTCTNAAAGGTTNNGAGGGGGAAGAGGCCCCCCCCCCCGCGGGGNNNNNTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCAAAATAAANGGGAGGAAAAAGGNNGNCCNNNNGGGGGGGGGNNNTTTTTTNGGAAGAGAGAGGAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAANGGGGAGGGNGGAGGAGAGAAGNAAGANAGNAGNAAAAAANGNAAAAAAANAAAAGGAAAAAAGCCCCCCCCAAAAA
AAAAGGGAGGNNAGAAGGGAAGAGAGAGGGAAAGACNAANNAANAAACCCCCCNCAGGGGGGGGGGGGGGGACAAGAAGAAAACCCAAACCCNCCAACAC
CAAAACACNCCCCCAAACCCAAACGAGGGGGGGGGGGGGGCCAAAAAAACACAACCAAACACACNACCCAACAGACGGAGCCGNACGGGGAGCGGGACGA
CGAGACAAAAAAGCACAACACAACACACCNCCCCCAGACCAAGCGGCGCCACAAAAGCAACCCCNCACAACCCAACAGGGGCGCCCGCAACACGCGCGCA
ACAGCCAACCGGCACAACCACCCACACCCAACGCAACGCGCAGCGACAACAAACCANGAGCACCACAGCCGCGCCGGCCACCAACCAAAAAGAAAACACA
ACCGCAACCAAGACAACAAGAGAAAAAAACAGAGACGCCGCAACACNACCCCCCCCCCCCAAACNCGGGGGGGGG
GGGGGGGGGGGGAACAAACAACAAA
CACCACCCCCCCCCCACAACCAACCAACAAACACCACACCAACCACAACAACAACACCCCCCACCAAACAAAACCAACAACCAACCACCACCCAAACAAC
AACCACCACCCAACAAACAACCCCAACCAACACACCCCCACCCACCCCCCCCACCAANAACCACCCCCAACACCCACCCAACCCCCAACCAAAACACACC
AACCACCCACAAAAAACACACACCACNCCACACAAACCCAAACCCCCAAAAAACCCACCANCAACACCAACAACCCAACCACACAAANCACCCCCCCAAC
AAACAACCCCACACCCAACCACACCACAACCCCCAACCCACACCCACCAACCCAACACACACCACAAACNACNACACACCCCACNCCAACACCCACCACA
CCAAAAACAACAAAACACACCCACACCACCCCCAACAAACACACCAAAACCCCCAACCCACCACCACACCACCAACCCACAACCCCACAACCCACACCNA
CCNCCCACAACACAAAAACACCCACAACACCCNAACCCCACAAACCCCCCCAACACAAACCCAAACACCCCAACCACCACAACACACCAACCACCACAAA
ACACNACACCCCACAACAC
>LE_HBa0233H10_T7_390724 (trimmed for quality and cloning vector)
GGGGGGGG

This is probably not a useful sequence.

Problems:
  • Short cloning insert
  • Low complexity
Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
  • Not screened for contaminants
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
not recorded
Expected error %
0.390181
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0233H10
Clone
Clone name
hba-233h10
LE_HBa0233H10
P233H10
Clone type
BAC
Contamination
none
Estimated length
92,326
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found