Clone Read LE_HBa0216L02_SP6_391302

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0216L02_SP6_391302
Primer
SP6
ID from Seq. Facility
LE_HBa_216_L02-SP6
Chromatogram
Sequence 
Version
1 (current)
Length (bp)
685 trimmed for vector and quality, 969 raw
Sequence
>LE_HBa0216L02_SP6_391302 (raw untrimmed)
CGGGCGAGTGGTGTCAGAATTATTTGAACGGGTGCTTGAAGGTTCAATATGAAGAATGCCAAGCCAGTTAATACACCACTTGCAGCCCATTTCAAGTTGA
GCAAGCGTTGTTGTCCTACAACCGAGAAAGAAAAGGAAAGTATGTCTCATATTCCTTACTCCTCTGTTGTTGGTTCATTGATGTATGCCATGGTGTGTAC
AAGACCGGATATAGCACATGCTGTTGGATTGGTTAGCAGATACTTGGCAAATCCGAGCAAGGTTCATTGGGAAGCTGTAAAGTGGATCTTAAGATATTTG
CGAGGCACATCAAATCTGAGTTTGTGTTTTGGAGGTGGTGAGCCTATTCTTGAGGGATTTACGGATGCTGACATGGCTGGAGATCTTGATAACCGGAAGT
CTACCTCGGGTTACTTGTTCAAATTTGCAAGGGGAGCCATTTCATGGCAATCCAAGCTACAGAAGTGTGTAGCGTTGTCTACAACCGAGGTAGAATATAT
AGCAGCAGTGGAAGCAAGCAAAGAAATGCTTTGGTTAAAGCGTTTCCTTCAAGAGTTAGGTTTGAAGCAAAGTGAGTATGTTGTATTTTGTGATAGTAAA
AGTGCTATGGACTTGAGCAAAAACATCATGTACCATGCTCGCACAAAGCATATTGATGTGAGATATCATTGGTTGCGTGTTGTCATTAAAGAGCGACTAA
TGAAGTTGAAGAAGATTCACACCAACAAGAATGGTGCTGATATGTTGACAAAGGTGGTCCCTGGAAACAAGCTTTGAATTTGTTCCAAGCTTGCAGGTAT
GTCTTCCTTGATGACCTTTTATGTTTGGGCTCCCCGAACCTGGGCTGGAAGGGGGAGATTGTTTAAAGGACCAGCCCCATTTGTTATATTTTTTTTAAGT
GAAAGCCCAATCCCTTATTGATGTGTGGCCCAAAATGTTTTGGGGCCTTGTTTAACTTTTTCCAAAAAN
>LE_HBa0216L02_SP6_391302 (trimmed for quality and cloning vector)
TTGAACGGGTGCTTGAAGGTTCAATATGAAGAATGCCAAGCCAGTTAATACACCACTTGCAGCCCATTTCAAGTTGAGCAAGCGTTGTTGTCCTACAACC
GAGAAAGAAAAGGAAAGTATGTCTCATATTCCTTACTCCTCTGTTGTTGGTTCATTGATGTATGCCATGGTGTGTACAAGACCGGATATAGCACATGCTG
TTGGATTGGTTAGCAGATACTTGGCAAATCCGAGCAAGGTTCATTGGGAAGCTGTAAAGTGGATCTTAAGATATTTGCGAGGCACATCAAATCTGAGTTT
GTGTTTTGGAGGTGGTGAGCCTATTCTTGAGGGATTTACGGATGCTGACATGGCTGGAGATCTTGATAACCGGAAGTCTACCTCGGGTTACTTGTTCAAA
TTTGCAAGGGGAGCCATTTCATGGCAATCCAAGCTACAGAAGTGTGTAGCGTTGTCTACAACCGAGGTAGAATATATAGCAGCAGTGGAAGCAAGCAAAG
AAATGCTTTGGTTAAAGCGTTTCCTTCAAGAGTTAGGTTTGAAGCAAAGTGAGTATGTTGTATTTTGTGATAGTAAAAGTGCTATGGACTTGAGCAAAAA
CATCATGTACCATGCTCGCACAAAGCATATTGATGTGAGATATCATTGGTTGCGTGTTGTCATTAAAGAGCGACTAATGAAGTTG

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.970441
Expected error %
0.143962
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0216L02
Clone
Clone name
hba-216l2
LE_HBa0216L02
P216L02
Clone type
BAC
Contamination
none
Estimated length
not yet estimated
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found